Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3077g00015 ATGCAATATAGTTGTTCCCCACGCAATATGGCTAAACGCTTCAAGCTGAAATTCACTATCCCTTCATTTCAAATGTGTCGCTCAAAAAACCTTTCCTCCTTCCCAGGAAATCCTGTTCCTGCTATTTACCGTCTTTCTCCTGTGAAAACCAAAGCACGTGATGTTTTATATCCAAAACTCCCTGCTCCGCCACCGTCAACACCTGAAGACCACTGCAAAGTTAAATCCAGAGGCCGAAAAAGCACGTCGAGCGTTCAATCAAGGAGAAGTGACTTTCTAATTGATAACTTGAACGAAGAAGAAAGTGAAACTTTGATTTCTTGCATGACAAGTTTCTCAGATGAGTTTTGTCACGATGAGATGGTCCATTATCCCCACAAACCGGAGAAAGAGTTAGTTAGCAGGCACAGAAGGAAGATAAGCAGCGTAAAAACGGTTCAGAGAACGAGATTTCATCACACTTTGGAGAATCGAAAAGGACAAGAAATGGCGCAGGTGAAGAAAAGGACGGTGATGTCCACGCGCAGCATAATGGAGGGGAAGGTGAAAGAGTGCTTTGCTGTGGTGAAAAAATCCAAGGAACCGTATGAAGATTTCAAAAAATCGATGCTGGAGATGATAACGGAGATGGAGATGTCTGAGGCTGAGGATTTGGAACACCTTTTGCAGTGTTTCCTGTCTTTGAACTCACGGAGTTATCACGCTGTAATTGTGCGAGCTTTCATGGAGATCTGGCAACAAATGTTCATTTGGAACCCTTCATCGATCAAAAATCTTCAAACAGACGTTAAAACTGGTCTAGAAGCTGCGTAG 813 0.4317 MQYSCSPRNMAKRFKLKFTIPSFQMCRSKNLSSFPGNPVPAIYRLSPVKTKARDVLYPKLPAPPPSTPEDHCKVKSRGRKSTSSVQSRRSDFLIDNLNEEESETLISCMTSFSDEFCHDEMVHYPHKPEKELVSRHRRKISSVKTVQRTRFHHTLENRKGQEMAQVKKRTVMSTRSIMEGKVKECFAVVKKSKEPYEDFKKSMLEMITEMEMSEAEDLEHLLQCFLSLNSRSYHAVIVRAFMEIWQQMFIWNPSSIKNLQTDVKTGLEAA 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3077g00015 270 NCBIfam uncharacterized plant-specific domain TIGR01568 186 248 IPR006458 -
Gabi3077g00015 270 MobiDBLite consensus disorder prediction 56 88 - -
Gabi3077g00015 270 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 83 249 IPR038933 GO:0045892
Gabi3077g00015 270 ProSiteProfiles OVATE domain profile. 188 247 IPR006458 -
Gabi3077g00015 270 Pfam Transcriptional repressor, ovate 192 249 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3077g00015 Gabi-Chr3077 106161 107116 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi3077g00015 Ovate 2.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3077g00015 - - gmx:102662518 325.479