Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3076g00035 ATGAGCACTACTACCACTATGTTGGATTCTTTAACCTATTGCCAAAGCTTTAAGGGATATGACCTTACCAAACAAAAGAGTCCGGGTTACTCTCATGCTATTTCACGATTCTGTAGAAGTTCTATTTTGATGCTTTATTCAGTTAACAAGCAAGTGCCGCTACTGTCACGTGGTGTTAGTCACGGGATATTTCATGGGACTTCTGTGTCAGAAAATTTCATTAAAAGGAGACATCTCAATGTTCCATCATTTTCTGGTTGGAAAGGATTCTATTTCTCTAAGTGTAGGCCATTACGTTGGGAACGGTTACAGACTAATGTAGCATATGATGTTGCTGGTGCTGTTGATGTCATCAATGATTTGGGATTGGATACTCTTACTTTCTTGGCTGTGACTGTCTTAATTGTGCCCACATTCAAGTCAATTAAAGCCAGTCCTATACTTGGTTTCTTCTTTGCTGGGGTGGTGCTCAATCAGTTTGGTTTAATTAGAAACCTTACAGATGTTAAAATTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTAGAGCTTTCACTTGCACGTCTGAAAGCGCTTGCAAAATATGCCTTTGGGATGGGATTGGCTCAGGTTGTACTATCTACTTTAGCATTTACTGCTTTTGAACTTCCACCAAATGGGGCCATTGGAACACAAATTTTACAATTCCTTTTCCACTCAAGGTCAGATCTGGTGAACATCAGAAGTGTCGATGAAGCTGTAGTGATCGGTGCTGCTCTCTCTCTGTCATCTTCTGCCTTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCTACAAGATTTGGTTCGGCAACTCTTGGAATACTTCTTTTGCAGGACTTAGCTGTTGTTCCTCTTTTAGTCATTCTTCCAATACTAGAGAGCCAGAATATGTCTGAGGAAAGTGTTTTGCCCATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGTCTGCTTTCTCTTGGGGCAAAGTACATTCTCAGAAGAGTTTTCGAGGTTGTTGCAGATACAAGGAGCTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTGTTGCCGGGACTTCACTAGTCACACAGAATTTGGGCTTTAGTGATACGCTTGGAGCATTTTTAGCTGGAGCAATCTTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCTGACATAAGACCGTTTAGAGGCTTACTGCTTGGGTTATTTTTTCTAAGTACAGGAACTTCAATTGATATGCAGCTCCTTTTGCGAGAGTGGCCAAATGTACTTTCACTCTTGGGAGGTTTAATTGCTATCAAGACATTGATCATTACTGCAATTGGTCCTCGTGTTGGGCTTACTTTACAAGAGAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTAGTTTTCTCCTTAGCAAATAGGCTTGGGGTGCTTCCGCTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGTCATTAACCCCCTTTCTAAATGAAGCTGGAAGAAGGGCTGCTAGTTATATTGAAGACAAATATGATGCTGAGAATAAACAGAAACCAGCTGAGATGTTGAACTTCAATGCTAGTGAACCTGTTGTTATTCTTGGATTTGGACAGATGGGCCAGGTCCTTGCCAATTTCCTATCAAATCCATTGGCTTCAGGAGGAGATAGTGACGCAGTAGGATGGCCTTATGTGGCATTTGATCTTGACCCCACAGTAGTAAAGGCAGCTAGAAAACTTGGTTTTCCTATTCTCTACGGGGATGGATCACGTCCGACTGTTCTTCAATCTGCCGGTATCTATTCTCCGAAAGCTATCATGGTTATGTACAGTGGGAAAAAGAAGATTATGGAAGCTGTTCAAAGATCCCAATCTATGCCAAAGCTAAAGATCTCAAGCATCTTTTAG 1953 0.4168 MSTTTTMLDSLTYCQSFKGYDLTKQKSPGYSHAISRFCRSSILMLYSVNKQVPLLSRGVSHGIFHGTSVSENFIKRRHLNVPSFSGWKGFYFSKCRPLRWERLQTNVAYDVAGAVDVINDLGLDTLTFLAVTVLIVPTFKSIKASPILGFFFAGVVLNQFGLIRNLTDVKILSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTAFELPPNGAIGTQILQFLFHSRSDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDLAVVPLLVILPILESQNMSEESVLPMLAQESLKALGGLGLLSLGAKYILRRVFEVVADTRSSEAFVALCLLTVAGTSLVTQNLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLSTGTSIDMQLLLREWPNVLSLLGGLIAIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMSLTPFLNEAGRRAASYIEDKYDAENKQKPAEMLNFNASEPVVILGFGQMGQVLANFLSNPLASGGDSDAVGWPYVAFDLDPTVVKAARKLGFPILYGDGSRPTVLQSAGIYSPKAIMVMYSGKKKIMEAVQRSQSMPKLKISSIF 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3076g00035 650 Gene3D - 545 649 - -
Gabi3076g00035 650 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 546 643 IPR036291 -
Gabi3076g00035 650 Gene3D - 120 520 IPR038770 -
Gabi3076g00035 650 FunFam K(+) efflux antiporter 3, chloroplastic 120 519 - -
Gabi3076g00035 650 Pfam TrkA-N domain 546 646 IPR003148 GO:0006813
Gabi3076g00035 650 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 108 646 - -
Gabi3076g00035 650 ProSiteProfiles RCK N-terminal domain profile. 545 650 IPR003148 GO:0006813
Gabi3076g00035 650 Pfam Sodium/hydrogen exchanger family 127 512 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3076g00035 Gabi-Chr3076 430246 448784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3076g00035 5 637 Inorganic Solute Cotransporters AT4G04850 73.396 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3076g00035 K03455 - gmx:100798214 1037.33