Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3076g00025 ATGATGCCCCCCGAGCAAGAAGCCACTATTGCACCAAACATTCCAGCCAGCACAAACCGAACCGAGAACAGTTCGGTCCACGTCGAACCAGAGGGTTCTACAACCAACAAAGTTAAACCCAGTTCCGATCATGATGATGATAATGGCATTCCTGCACAACCTCAACCTCAACCAACATCGTCACCAGCAAAGTTTTCCATTATTCACCAATCCTTGCGTCCTGTTACCCTCAAATTTGAAGATGTTTCTTACAACATAACCTTCCCAAGCAAAAATAACGGTTGTGTTTTACCTAAAGAGCCAAAGCTAAGGAGGAAAATAATCACCGGCGTGAGTGGCATAGCGGGTCCCGGCGAGTTAACGGCAATGCTGGGTCCCTCAGGGAGCGGCAAGACGACCCTGCTCACCGCCCTGGCGGGGAGGCTCGCCGGAAAAGTCTCCGGAAGCATAACATACAATGGCCACACTGACTCCAGTTTCATGAAACGCAAGATAGGGTTTGTGTCACAAGATGATGTTCTATACCCTCACCTCACAGTGCTTGAAACACTCACCTATGCTGCTTTGTTGAGGCTTCCAAAGACTCTCACCAAAGAAGAGAAAGTGGAGCATGCTGAGAGGATCATCACGGAGCTTGGCCTCACACGGTGTCGTAACACCCCTGTTGGTGGCTGCATGGCCTTGTTCCGTGGCATTTCGGGTGGGGAACGAAAACGGGTCAGTATCGGGCAGGAGATGTTGGTTAACCCGAGTTTGTTGTTGTTGGATGAACCGACTTCCGGCCTCGACTCCACGACGGCTCAGCTCATCGTGTCGGTGCTCCGGGGTCTCGCCCGGGGTGGCCGGACGGTGGTGACCACCATTCATCAGCCATCAAGCCGGTTGTACAGGATGTTTGATAAGGTGGTGGTGTTGTCTGATGGGTACCCGATATACAGTGGGCATTCGGGTCGGGTCATGGATTATCTTGAATCCATTGGGTATGTGCCAGCTTTCAACTTCATGAACCCGGCAGATTTTCTGCTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACATGATGATCAGATAGACCACCATGAGGATCAAGCTTCAGTCAAACAGTCCCTAATTTCATCCTATAAGAAGAACTTATATCCTGCTCTTAAAGAAGTGATTCAGCAACACAACAGTGACCCAGGGGTTTTAACATCAGGAACACCAAGACGTTCAGATAACCAATGGAACACTAGCTGGTGGGAGCAATTCAAGGTGCTGCTTAAGAGGGGTTTACAAGAGAGGAGGCATGAATCCTTTTCTGCGTTAAGGATTTTCCAAGTCTTGTCTGTATCCATTCTGTCAGGACTTCTTTGGTGGCACTCTGATCCTTCACACATACAAGATCAGGTAGGACTACTTTTCTTCTTCTCCATCTTCTGGGGGTTCTTCCCTCTCTTTAATGCCATCTTTGCATTTCCTCTGGAGAGACCAATGCTGATAAAAGAAAGATCATCAGGCATGTACCATCTCTCCTCCTACTATGTTGCCAGGATGGTTGGGGACCTACCAATGGAGCTTGTGCTTCCTACTATCTTTGTAACTATCACCTATTGGATGGGTGGTCTCAAGCCTTCACCAGTTACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTGCTAGTCTCTCAAGGAATAGGCCTAGCACTTGGGGCCATACTCATGGATGTGAAGCAGGCCACAACTCTAGCTTCAGTGACCATGCTGGTGTTTCTGTTAGCTGGTGGTTACTACATTCAGCAAATGCCTTCTTTTATAGCTTGGTTGAAGTACATTTCTTTCAGTCACTACTGTTATAAGCTTCTGGTAGGAGTCCAGTATTCAGCAAACGATGTCTACGAGTGTGGACCAGGGTTGCATTGTAGGATAAGGGATTTTCCTGCCATAAAGTGTCTGGGGAGGCTTGATAATATGTGGGGAGATGTGGCTGCATTGACTGTAATGTTTATTGGATACAGAATTGTTGCATATCTAGCTTTGAGGATGGGGCATCCTCATTGA 2043 0.4767 MMPPEQEATIAPNIPASTNRTENSSVHVEPEGSTTNKVKPSSDHDDDNGIPAQPQPQPTSSPAKFSIIHQSLRPVTLKFEDVSYNITFPSKNNGCVLPKEPKLRRKIITGVSGIAGPGELTAMLGPSGSGKTTLLTALAGRLAGKVSGSITYNGHTDSSFMKRKIGFVSQDDVLYPHLTVLETLTYAALLRLPKTLTKEEKVEHAERIITELGLTRCRNTPVGGCMALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQLIVSVLRGLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGHSGRVMDYLESIGYVPAFNFMNPADFLLDLANGIVADVKHDDQIDHHEDQASVKQSLISSYKKNLYPALKEVIQQHNSDPGVLTSGTPRRSDNQWNTSWWEQFKVLLKRGLQERRHESFSALRIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLERPMLIKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSPVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPSFIAWLKYISFSHYCYKLLVGVQYSANDVYECGPGLHCRIRDFPAIKCLGRLDNMWGDVAALTVMFIGYRIVAYLALRMGHPH 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3076g00025 680 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 332 IPR003439 GO:0005524
Gabi3076g00025 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 326 IPR027417 -
Gabi3076g00025 680 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524|GO:0016887
Gabi3076g00025 680 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 43 671 - -
Gabi3076g00025 680 SMART AAA_5 117 310 IPR003593 GO:0016887
Gabi3076g00025 680 CDD ABCG_EPDR 74 314 - -
Gabi3076g00025 680 FunFam ABC transporter G family member 22 95 326 - -
Gabi3076g00025 680 Pfam ABC-2 type transporter 289 353 IPR043926 GO:0140359
Gabi3076g00025 680 MobiDBLite consensus disorder prediction 1 63 - -
Gabi3076g00025 680 Pfam ABC transporter 114 260 IPR003439 GO:0005524
Gabi3076g00025 680 MobiDBLite consensus disorder prediction 11 37 - -
Gabi3076g00025 680 Pfam ABC-2 type transporter 415 621 IPR013525 GO:0016020|GO:0140359
Gabi3076g00025 680 Gene3D - 90 326 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3076g00025 Gabi-Chr3076 294193 298337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3076g00025 91 308 Calmodulin-binding Proteins AT2G36910 31.140 1.79e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3076g00025 K05681 - gmx:100783696 1152.89