Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3071g00001 ATGATTGACTTTGAGACACTATTGCTCTTCCTCGTACCAGTCCTACTAACATATATTTTCTTCTTCACCGTCAAACACACCACCACCACTACCACCACCGTTCTCCGCCTTCCACCAAGTCCACCATCCATCCCACTGATCGGCCACCTCCACCTCCTCACTCCATCCTTACACAAATCCTTCCAAACCCTCTCCTCTAAACACGGCCCTCTCCTCCACCTCAACCTCGGACCCTCCCGCCGACTCCTCCTCGTCTCCTCCGCCGCCACCGCCGCCGACATATTCAAGACCCACGACCTCGCCTTCTCTTCACGACCCGCATTTGCTTTCGCCGAGAAACTCCCTTATGGCAACTCCGGCTTCATCACCGCCCCCTACGGCCCCTACTGGCGCTTCATGAAGAAACTTTTCGTCACCGAACTTATGAGCTCGCGCCAAATGGAGCGCTCCAAAACCATCAGAGCCCAAGAAATAGAGCTTTTACTCAAAAGGGTGTTCGAGAATGCTCGCTCTAATGCTGCACTTGACTTGGGCTCTGAGTTCATGAAGTTCACCAACAACGTTACTTGTAGAATGGCCATGAGCACCAGGTGTTCGGAGAAATTCGAGGATGCAGAGAGGATTAGGAAGTTAGTAAAGGAGTCATTTGAGCTTGCTGCGAAGCTGTGCTTTGGGGATGTGTTGGGCCCTTTCAAGGAGTTGAGTTTTTGGGTTTATGGGAAAAAGGCTACGGATTTAAGCATGAGGTATGATGAGTTGTTGGAAAAGTTGCTGAAGGAGCATGAAGAGAGAAGATTAGTAGGTGGAAATGGTGGTGATGAGATTGAGAGGGATTTGATGGATATTCTGTTGGATGTTTATCATGGTGCTTGTGCAGAGTACAAGATCACAAGGACCCATATCAAAGCCTTCTTTTTGGATCTCTTCATTGGAGGCACAGACACCTCAGCAGAAGCAATGCAATGGACAATGGCTGAACTCCTTAACCATCCTGAAGCATTCAAGAAGGTAAGAAATGAGATAGAGTTAGTCACTGGGAATGTTAGGCTAGTTGAAGAATCAGATATCCCAAACCTGCCATATTTGCAAGCAGTTGTGAAGGAAACATTGAGACTTTACCCACCAGCGCCAGTAGCAACAAGAGAATGCCGCCAAGACTGCAAAATTAATGGCTATGATGTACCAGCAAAAACAGCAGTAGCAATCAATTTATATGCTATAATGAGGGACAAAGATTCTTGGGATGATCCAAATGAATTCCACCCTGAAAGGTTCTTGGTCTCATTGAAGGAACAGGAGGATGATGATCCAAGTGATCATCAGAATGATGCTACTAAGAGAATGAACTTCAATTTTGTTCCATTTGGAGCAGGAAGAAGAGGGTGCCCAGGGACAACACTGGCATTCAACATGATTAACACTGTAGTTGCTGCTATGGTTCAGTGCTTTGATTGGAAAATTGGTGAAGATGGAAAAGGAGAAAAGGTTGATATGCAATCTGGATCTGGCATGTCTTTGAGCATGGTTCATCCACTTATTTGTCTTCCTGTAGTACATTTTAACCCATTTCATGAATAA 1578 0.4607 MIDFETLLLFLVPVLLTYIFFFTVKHTTTTTTTVLRLPPSPPSIPLIGHLHLLTPSLHKSFQTLSSKHGPLLHLNLGPSRRLLLVSSAATAADIFKTHDLAFSSRPAFAFAEKLPYGNSGFITAPYGPYWRFMKKLFVTELMSSRQMERSKTIRAQEIELLLKRVFENARSNAALDLGSEFMKFTNNVTCRMAMSTRCSEKFEDAERIRKLVKESFELAAKLCFGDVLGPFKELSFWVYGKKATDLSMRYDELLEKLLKEHEERRLVGGNGGDEIERDLMDILLDVYHGACAEYKITRTHIKAFFLDLFIGGTDTSAEAMQWTMAELLNHPEAFKKVRNEIELVTGNVRLVEESDIPNLPYLQAVVKETLRLYPPAPVATRECRQDCKINGYDVPAKTAVAINLYAIMRDKDSWDDPNEFHPERFLVSLKEQEDDDPSDHQNDATKRMNFNFVPFGAGRRGCPGTTLAFNMINTVVAAMVQCFDWKIGEDGKGEKVDMQSGSGMSLSMVHPLICLPVVHFNPFHE 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3071g00001 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Gabi3071g00001 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 Pfam Cytochrome P450 38 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 511 - -
Gabi3071g00001 525 FunFam Cytochrome P450 family protein 29 514 - -
Gabi3071g00001 525 CDD CYP93 69 516 - -
Gabi3071g00001 525 Gene3D Cytochrome P450 22 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3071g00001 525 SUPERFAMILY Cytochrome P450 34 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3071g00001 Gabi-Chr3071 6337 10009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3071g00001 2 523 Cytochrome P450 AT2G42250 48.197 2.06e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3071g00001 K23814 - gmx:100790065 762.296