Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3069g00039 ATGGAGGGTAACAAGGACGAAGCATTGAGGTGCGTTCGCATCGCCGAGGAGGCGATTGCATCGGGGAACAAAGACCGCGCGCTCAAATTCATCAAAATCGCTCAGCGCCTAAACCACGATTTGCCGGTCGATGCGTTGCTGAACATGTGTGAACGCCTTGATTCTCAATCCTCCGCGTCTTCCTCCGCCGCAGCCGGCGGCGGCGTAGGCGGAGCCAAGACGTCGAACGGTCCGACGAGAAGTGAGGAGGGTTTGAATGGGGAGAGGAGTTACACGGAGGAGAATGTTCAGTTAATTAGGGAGATTAAGGGTAAGAGCGATTACTATGCCATTCTGGGATTGGAGAAGAGTTGTTCCGTTGAAGAGATTAGGAAGGCGTATAGGAAACTTTCGTTGAAGGTTCATCCTGATAAGAACAAGGCCCCAGGTTCCGAAGAGGCGTTTAAGAAGGTGTCAAAGGCTTTCAAGTGTTTGAGTGATGATGGTTCGAGGAGGCAGTATGATCAGACAGGACTAGTTGATGAATTTGAATACAACCAGCAATACAATGTTAGGCGCAGAAGGAGAAGGACAACAACAACTGCACGTGATTTTTTTGATGATGAGTTTGATCCTGATGAGATATTTAGGGCATTCTTTGGTCAATCGGAAGTTTTTGGTAGAACTAATGTTTATAGGGCTAGAGGGATGGGTAGTAGTCACCAGAGGCAAGAGTTTCATGGTGGTGGTGGAGGAGGGCATAATATTATGCTGCTGGTTCAACTTTTGCCCTTCTTGATTATTATTCTGCTTGCTTACTTGCCCTTTTCTGAACCTGATTACTCTTTGCAAAAGAATTACACTTACCAGATTCCAAAGACAACTGAGGACTATGGGGTTCAGTTTTTCGTTAAATCTCACGCGTTTGATGCTAACTATCCGCAGGGAAGTTCTGCTCGTGCAGCTGTTGAGGACAATGTCATAAAGGATTATAAGAATATGCTTCGTCGCTATTGTCAAGTAGAGATTCAGAGACGAAGTTGGAATAGGAATCTGCCTACTCCTCACTGTGAAAAGCTTCAAAATTTTGGAGTAGCCTGA 1080 0.4602 MEGNKDEALRCVRIAEEAIASGNKDRALKFIKIAQRLNHDLPVDALLNMCERLDSQSSASSSAAAGGGVGGAKTSNGPTRSEEGLNGERSYTEENVQLIREIKGKSDYYAILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVDEFEYNQQYNVRRRRRRTTTTARDFFDDEFDPDEIFRAFFGQSEVFGRTNVYRARGMGSSHQRQEFHGGGGGGHNIMLLVQLLPFLIIILLAYLPFSEPDYSLQKNYTYQIPKTTEDYGVQFFVKSHAFDANYPQGSSARAAVEDNVIKDYKNMLRRYCQVEIQRRSWNRNLPTPHCEKLQNFGVA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3069g00039 359 SUPERFAMILY Chaperone J-domain 103 213 IPR036869 -
Gabi3069g00039 359 CDD DnaJ 107 160 IPR001623 -
Gabi3069g00039 359 Pfam DnaJ domain 107 168 IPR001623 -
Gabi3069g00039 359 MobiDBLite consensus disorder prediction 59 89 - -
Gabi3069g00039 359 PANTHER AT29763P-RELATED 1 355 - -
Gabi3069g00039 359 PRINTS DnaJ domain signature 109 127 IPR001623 -
Gabi3069g00039 359 PRINTS DnaJ domain signature 127 142 IPR001623 -
Gabi3069g00039 359 PRINTS DnaJ domain signature 143 163 IPR001623 -
Gabi3069g00039 359 SMART dnaj_3 106 163 IPR001623 -
Gabi3069g00039 359 FunFam Chaperone protein dnaJ 49 103 224 - -
Gabi3069g00039 359 Pfam Domain of unknown function (DUF1977) 270 340 IPR015399 -
Gabi3069g00039 359 Gene3D DnaJ domain 104 224 IPR036869 -
Gabi3069g00039 359 ProSiteProfiles dnaJ domain profile. 107 171 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3069g00039 Gabi-Chr3069 310703 317117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3069g00039 102 168 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.028 1.40e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3069g00039 K09518 - qsa:O6P43_003572 513.457