Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi3069g00035 | ATGGAGGGTAACAAGGACGAAGCATTGAGGTGCGTTCGCATCGCCGAGGAGGCGATTGCATCGGGGAACAAAGACCGCGCGCTCAAATTCATCAAAATCGCTCAGCGCCTAAACCACGATTTGCCGGTCGATGCGTTGCTGAACATGTGTGAACGCCTTGATTCTCAATCCTCCGCGTCTTCCTCCGCCGCAGCCGGCGGCGGCGTAGGCGGAGCCAAGACGTCGAACGGTCCGACGAGAAGTGAGGAGGGTTTGAATGGGGAGAGGAGTTACACGGAGGAGAATGTTCAGTTAATTAGGGAGATTAAGGGTAAGAGCGATTACTATGCCATTCTGGGATTGGAGAAGAGTTGTTCCGTTGAAGAGATTAGGAAGGCGTATAGGAAACTTTCGTTGAAGGTTCATCCTGATAAGAACAAGGCCCCAGGTTCCGAAGAGGCGTTTAAGAAGGTGTCAAAGGCTTTCAAGTGTTTGAGTGATGATGGTTCGAGGAGGCAGTATGATCAGACAGGACTAGTTGATGAATTTGAATACAACCAGCAATACAATGTTAGGCGCAGAAGGAGAAGGACAACAACAACTGCACGTGATTTTTTTGATGATGAGTTTGATCCTGATGAGATATTTAGGGCATTCTTTGGTCAATCGGAAGTTTTTGGTAGAACTAATGTTTATAGGGCTAGAGGGATGGGTAGTAGTCACCAGAGGCAAGAGTTTCATGGTGGTGGTGGAGGAGGGCATAATATTATGCTGCTGGTTCAACTTTTGCCCTTCTTGATTATTATTCTGCTTGCTTACTTGCCCTTTTCTGAACCTGATTACTCTTTGCAAAAGAATTACACTTACCAGATTCCAAAGACAACTGAGGACTATGGGGTTCAGTTTTTCGTTAAATCTCACGCGTTTGATGCTAACTATCCGCAGGGAAGTTCTGCTCGTGCAGCTGTTGAGGACAATGTCATAAAGGATTATAAGAATATGCTTCGTCGCTATTGTCAAGTAGAGATTCAGAGACGAAGTTGGAATAGGAATCTGCCTACTCCTCACTGTGAAAAGCTTCAAAATTTTGGAGTAGCCTGA | 1080 | 0.4602 | MEGNKDEALRCVRIAEEAIASGNKDRALKFIKIAQRLNHDLPVDALLNMCERLDSQSSASSSAAAGGGVGGAKTSNGPTRSEEGLNGERSYTEENVQLIREIKGKSDYYAILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVDEFEYNQQYNVRRRRRRTTTTARDFFDDEFDPDEIFRAFFGQSEVFGRTNVYRARGMGSSHQRQEFHGGGGGGHNIMLLVQLLPFLIIILLAYLPFSEPDYSLQKNYTYQIPKTTEDYGVQFFVKSHAFDANYPQGSSARAAVEDNVIKDYKNMLRRYCQVEIQRRSWNRNLPTPHCEKLQNFGVA | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi3069g00035 | 359 | SUPERFAMILY | Chaperone J-domain | 103 | 213 | IPR036869 | - | |
| Gabi3069g00035 | 359 | CDD | DnaJ | 107 | 160 | IPR001623 | - | |
| Gabi3069g00035 | 359 | Pfam | DnaJ domain | 107 | 168 | IPR001623 | - | |
| Gabi3069g00035 | 359 | MobiDBLite | consensus disorder prediction | 59 | 89 | - | - | |
| Gabi3069g00035 | 359 | PANTHER | AT29763P-RELATED | 1 | 355 | - | - | |
| Gabi3069g00035 | 359 | PRINTS | DnaJ domain signature | 109 | 127 | IPR001623 | - | |
| Gabi3069g00035 | 359 | PRINTS | DnaJ domain signature | 127 | 142 | IPR001623 | - | |
| Gabi3069g00035 | 359 | PRINTS | DnaJ domain signature | 143 | 163 | IPR001623 | - | |
| Gabi3069g00035 | 359 | SMART | dnaj_3 | 106 | 163 | IPR001623 | - | |
| Gabi3069g00035 | 359 | FunFam | Chaperone protein dnaJ 49 | 103 | 224 | - | - | |
| Gabi3069g00035 | 359 | Pfam | Domain of unknown function (DUF1977) | 270 | 340 | IPR015399 | - | |
| Gabi3069g00035 | 359 | Gene3D | DnaJ domain | 104 | 224 | IPR036869 | - | |
| Gabi3069g00035 | 359 | ProSiteProfiles | dnaJ domain profile. | 107 | 171 | IPR001623 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gabi3069g00035 | Gabi-Chr3069 | 310696 | 317117 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi3069g00035 | 102 | 168 | SUVH1 or 3-interacting DNAJ domain-containing protein superfamily | AT2G01710 | 38.028 | 1.40e-08 | 53.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi3069g00035 | K09518 | - | qsa:O6P43_003572 | 513.457 |