Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3069g00025 ATGGAGGATTTTGGGGAGCAAAAGCGGAAGCAGCGAGAGTTTGCTTTGGCATCGGTGAGCGACTTGTCTTCTCTTTCTTCCTCTGCTTCGCCTGGGTTTGCTCGCTTCACCGGCGACGGTCTTCAAATTCAGCATGAATCTCATCAGATTGCTCTCAATGTTGATCTTCCAGCTATTCAGCTATTCAGGTTAGGTCCTGTTCAATCGGTTTGCACGGTGGAAGGGTCTGATGCTGGCAAACAGACATCGTATTCCAGGGGAGTCGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGAAACTTACCAAATGGAACTAATGCAATAACTTCTAAAAGCAAATTTGATGAAAAGATAGAACCATCTTCGGCAAAAATGTACTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTACTATGCTGCTGTTATTGAGAATCGTGCTGATTTCACGGGTCGTGTAGTAGTTGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGAAAACTTATAGCTGGGAACCCAATACTGGGTCAGCGAATTACAGTGATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTAGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACCCCTAAAGGGAAAATGTTTCCTACAGTAGGAAGGATTCACATGGCTCCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTGTTTTGGCAACAACCAAACTATTTTGGTGTTGATTTGACGCCCTTACACGGGACTGCTTTCCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGACCCAAGGTTGTTAATAGCTCCTCCTATGTTCCACGTGATTGACTTCACCAAAATAAAAGAAGAAGAGCTGTATGAAATTGATATTCCTCTCAGATTCACCGCCACTGTGGGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCCCCTGGTTCACCAACAACTCATTGGTATCAATTACGCTGTGTTCTCTCCCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGGCTGCACTTGATTGCCCACAATGCACAGAGTTATACTATCTATTTAACATTGTCAGCTAAAATGTGGGGGCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTAAAAGAACCTTACTATAGAATGTCTCAACCGCAAGCTTATCCATTAACCCAAGATCAGCAACCTCAACCATTTTTACAGACACAGGATATACACATCCAATCCCAGGATTTGGATGAAGCTGAGATAATGCAACAGCCTTCGCCTAATTCATGTGCTCAGATTGACTCACTGATGCAGAATGCAAGTTGA 1611 0.4289 MEDFGEQKRKQREFALASVSDLSSLSSSASPGFARFTGDGLQIQHESHQIALNVDLPAIQLFRLGPVQSVCTVEGSDAGKQTSYSRGVAIQFRNEEESEAFHCVFQQWKKEFNVQGNLPNGTNAITSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPKGKMFPTVGRIHMAPFSDEYLFVEIANKALFWQQPNYFGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVIDFTKIKEEELYEIDIPLRFTATVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLTQDQQPQPFLQTQDIHIQSQDLDEAEIMQQPSPNSCAQIDSLMQNAS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3069g00025 536 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
Gabi3069g00025 536 CDD AdoMet_MTases 182 285 - -
Gabi3069g00025 536 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 100 466 IPR025799 GO:0016274|GO:0018216
Gabi3069g00025 536 Gene3D Vaccinia Virus protein VP39 122 283 IPR029063 -
Gabi3069g00025 536 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Gabi3069g00025 536 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Gabi3069g00025 536 FunFam Probable histone-arginine methyltransferase CARM1 285 492 - -
Gabi3069g00025 536 Pfam Ribosomal protein L11 methyltransferase (PrmA) 178 251 - -
Gabi3069g00025 536 Gene3D - 285 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3069g00025 Gabi-Chr3069 160441 170197 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3069g00025 143 433 C2H2 Transcription Factor Family AT3G12270 32.595 5.43e-39 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3069g00025 K05931 - gmx:100818828 959.518