Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3069g00010 ATGGATTTTTTAAACCAGGAGATGAGCATGCTTAGTCCTGAAGGTGAACTTAAAATTAGTTTTGGATATCAATGCAATAGTGATGGAGCTATCCCTTGCAAGGTTGCCAATGGCTACACAATCCTTCCTGAAGTACGTAGAACAAGCAGTTTTTCTTGCTTGTCTGGTGCTGCCGTAAGTGCAAATGCTACACTAGCCAACACAAATATCTGCAATGGAGTGATAGGAGAAGAAATCCTTCCTAGTTTGGACTCTCCTAATTCTTTTCGTAGGGTACCCTCTTCGCCAAGTTTTCCGAAGTTGGACATACTATCATCTTCTCTTCACAGTAATATGTCAAACCTCAGTTGCAGCCCATCCACTCCAAGTAGTATGCTTGAATATGACCCATGTACATTAAAATCCACGAGTGCTCCTTCCAGAAGTGAAAGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAGGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTCCTGGCTGGTACCCTTTATGACACTTTCATATCTTATTTTAATATGTTATGTTGGGATTTGGAATCAGATTCCACCAAAGCTTCTAACAATGTGGGTTTGGGTGGATCCTTTCAATACAAGTTGGATGATGGTCTTATTCTTCATGAGCATCAATCTTCGTCAAGATTTGAGGGAGACAACAATTCTAGTCTGAACATTAGTCCACCTGCCAAGTCAGAAACATCATGTAAATCATTTTCGCATGCGGTACTTGATAGCCTCCAACATGTGCTTAGTCAGGTTGAGAATGATTTCTTGTACATGGTCGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTGTTGGATCTTGTGTTTTGCTTGTGCTTCTTCATGGGAATGATTTGTATACACTTAATCTAGGGGACAGCAGAGCAGTATTGGCAACATGTGGCACAGATGACAGACTGAATGGGATTGAGAGCTTGAAAGCTATCCAGCTTACAGATAGTCATACCCTTGACAATGAAGCTGAAAGAGCTCAACTTCTAGCCAATCATCCTGATGATCCTAAAACCATTGTAGCAGGGAGAGTGAAAGGAAAACTGAAGGTTACGCGTGCTTTGGGAGTTGGCTACTTGAAAAAGAAAAATCTTAATGATGCTTTGATGGGAATCCTTCGAGTTTCTGATCTTAAAAGCCCGCCATATATTTCAACTGATCCATCACTGAATGTGCATAGAATCTCAAATTCTGATCGATTTGTTATAATCGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAAGCAGTGAAGCTTGTAGAGTCTTATATGTTGAACAACCCTTTTGGTGATCCAGCAAAGTTTCTTGTTGAACAACTAGTAGCAAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCTGCTGGTAGGAGGAGAAAGTACCATGATGATGTAACCGTAATTGTGATCATTCTAGGGATGAATCAACGTACTTCAAAGGCATCAATTTGCATCTAA 1590 0.4082 MDFLNQEMSMLSPEGELKISFGYQCNSDGAIPCKVANGYTILPEVRRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPNSFRRVPSSPSFPKLDILSSSLHSNMSNLSCSPSTPSSMLEYDPCTLKSTSAPSRSESFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTFISYFNMLCWDLESDSTKASNNVGLGGSFQYKLDDGLILHEHQSSSRFEGDNNSSLNISPPAKSETSCKSFSHAVLDSLQHVLSQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATCGTDDRLNGIESLKAIQLTDSHTLDNEAERAQLLANHPDDPKTIVAGRVKGKLKVTRALGVGYLKKKNLNDALMGILRVSDLKSPPYISTDPSLNVHRISNSDRFVIIGSDGLFDFFSNDEAVKLVESYMLNNPFGDPAKFLVEQLVARAADSAGFSMEELMNIPAGRRRKYHDDVTVIVIILGMNQRTSKASICI 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3069g00010 529 SMART PP2C_4 136 514 IPR001932 -
Gabi3069g00010 529 SUPERFAMILY PP2C-like 158 517 IPR036457 -
Gabi3069g00010 529 PANTHER PROTEIN PHOSPHATASE 2C 150 514 IPR015655 GO:0004722|GO:0006470
Gabi3069g00010 529 FunFam Probable protein phosphatase 2C 40 126 525 - -
Gabi3069g00010 529 ProSiteProfiles PPM-type phosphatase domain profile. 145 516 IPR001932 -
Gabi3069g00010 529 CDD PP2Cc 158 516 IPR001932 -
Gabi3069g00010 529 Pfam Protein phosphatase 2C 277 470 IPR001932 -
Gabi3069g00010 529 Gene3D - 119 525 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3069g00010 Gabi-Chr3069 108654 112569 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3069g00010 13 529 PP2C-type Phosphatase Gene Family AT3G16560 61.759 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3069g00010 - - gmx:100791404 819.69