Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3069g00009 ATGGATTTTTTAAACCAGGAGATGAGCATGCTTAGTCCTGAAGGTGAACTTAAAATTAGTTTTGGATATCAATGCAATAGTGATGGAGCTATCCCTTGCAAGGTTGCCAATGGCTACACAATCCTTCCTGAAGTACGTAGAACAAGCAGTTTTTCTTGCTTGTCTGGTGCTGCCGTAAGTGCAAATGCTACACTAGCCAACACAAATATCTGCAATGGAGTGATAGGAGAAGAAATCCTTCCTAGTTTGGACTCTCCTAATTCTTTTCGTAGGGTACCCTCTTCGCCAAGTTTTCCGAAGTTGGACATACTATCATCTTCTCTTCACAGTAATATGTCAAACCTCAGTTGCAGCCCATCCACTCCAAGTAGTATGCTTGAATATGACCCATGTACATTAAAATCCACGAGTGCTCCTTCCAGAAGTGAAAGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAGGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTCCTGGCTGGTACCCTTTATGACACTTTCATATCTTATTTTAATATGTTATGTTGGGATTTGGAATCAGATTCCACCAAAGCTTCTAACAATGGAGACAACAATTCTAGTCTGAACATTAGTCCACCTGCCAAGTCAGAAACATCATGTAAATCATTTTCGCATGCGGTACTTGATAGCCTCCAACATGTGCTTAGTCAGGTTGAGAATGATTTCTTGTACATGGTCGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTGTTGGATCTTGTGTTTTGCTTGTGCTTCTTCATGGGAATGATTTGTATACACTTAATCTAGGGGACAGCAGAGCAGTATTGGCAACATGTGGCACAGATGACAGACTGAATGGGATTGAGAGCTTGAAAGCTATCCAGCTTACAGATAGTCATACCCTTGACAATGAAGCTGAAAGAGCTCAACTTCTAGCCAATCATCCTGATGATCCTAAAACCATTGTAGCAGGGAGAGTGAAAGGAAAACTGAAGGTTACGCGTGCTTTGGGAGTTGGCTACTTGAAAAAGAAAAATCTTAATGATGCTTTGATGGGAATCCTTCGAGTTTCTGATCTTAAAAGCCCGCCATATATTTCAACTGATCCATCACTGAATGTGCATAGAATCTCAAATTCTGATCGATTTGTTATAATCGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAAGCAGTGAAGCTTGTAGAGTCTTATATGTTGAACAACCCTTTTGGTGATCCAGCAAAGTTTCTTGTTGAACAACTAGTAGCAAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCTGCTGGTAGGAGGAGAAAGTACCATGATGATGTAACCGTAATTGTGATCATTCTAGGGATGAATCAACGTACTTCAAAGGCATCAATTTGCATCTAA 1509 0.4082 MDFLNQEMSMLSPEGELKISFGYQCNSDGAIPCKVANGYTILPEVRRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPNSFRRVPSSPSFPKLDILSSSLHSNMSNLSCSPSTPSSMLEYDPCTLKSTSAPSRSESFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTFISYFNMLCWDLESDSTKASNNGDNNSSLNISPPAKSETSCKSFSHAVLDSLQHVLSQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATCGTDDRLNGIESLKAIQLTDSHTLDNEAERAQLLANHPDDPKTIVAGRVKGKLKVTRALGVGYLKKKNLNDALMGILRVSDLKSPPYISTDPSLNVHRISNSDRFVIIGSDGLFDFFSNDEAVKLVESYMLNNPFGDPAKFLVEQLVARAADSAGFSMEELMNIPAGRRRKYHDDVTVIVIILGMNQRTSKASICI 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3069g00009 502 PANTHER PROTEIN PHOSPHATASE 2C 150 487 IPR015655 GO:0004722|GO:0006470
Gabi3069g00009 502 Gene3D - 119 498 IPR036457 -
Gabi3069g00009 502 ProSiteProfiles PPM-type phosphatase domain profile. 145 489 IPR001932 -
Gabi3069g00009 502 SMART PP2C_4 136 487 IPR001932 -
Gabi3069g00009 502 SUPERFAMILY PP2C-like 158 490 IPR036457 -
Gabi3069g00009 502 Pfam Protein phosphatase 2C 227 443 IPR001932 -
Gabi3069g00009 502 CDD PP2Cc 158 489 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3069g00009 Gabi-Chr3069 108654 112571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3069g00009 13 502 PP2C-type Phosphatase Gene Family AT3G16560 64.588 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3069g00009 - - gmx:100791404 781.941