Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3069g00008 ATGAGCATGCTTAGTCCTGAAGGTGAACTTAAAATTAGTTTTGGATATCAATGCAATAGTGATGGAGCTATCCCTTGCAAGGTTGCCAATGGCTACACAATCCTTCCTGAAGTACGTAGAACAAGCAGTTTTTCTTGCTTGTCTGGTGCTGCCGTAAGTGCAAATGCTACACTAGCCAACACAAATATCTGCAATGGAGTGATAGGAGAAGAAATCCTTCCTAGTTTGGACTCTCCTAATTCTTTTCGTAGGGTACCCTCTTCGCCAAGTTTTCCGAAGTTGGACATACTATCATCTTCTCTTCACAGTAATATGTCAAACCTCAGTTGCAGCCCATCCACTCCAAGTAGTATGCTTGAATATGACCCATGTACATTAAAATCCACGAGTGCTCCTTCCAGAAGTGAAAGTTTTCTTAATGCTATGGAAGTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAGGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTCCTGGCTGGTACCCTTTATGACACTTTCATATCTTATTTTAATATGTTATGTTGGGATTTGGAATCAGATTCCACCAAAGCTTCTAACAATGTGGGTTTGGGTGGATCCTTTCAATACAAGTTGGATGATGGTCTTATTCTTCATGAGCATCAATCTTCGTCAAGATTTGAGGGAGACAACAATTCTAGTCTGAACATTAGTCCACCTGCCAAGTCAGAAACATCATGTAAATCATTTTCGCATGCGGTACTTGATAGCCTCCAACATGTGCTTAGTCAGGTTGAGAATGATTTCTTGTACATGGTCGAGCAGGAAATGGAGGAACGTCCAGATTTAGTTTCTGTTGGATCTTGTGTTTTGCTTGTGCTTCTTCATGGGAATGATTTGTATACACTTAATCTAGGGGACAGCAGAGCAGTATTGGCAACATGTGGCACAGATGACAGACTGAATGGGATTGAGAGCTTGAAAGCTATCCAGCTTACAGATAGTCATACCCTTGACAATGAAGCTGAAAGAGCTCAACTTCTAGCCAATCATCCTGATGATCCTAAAACCATTGTAGCAGGGAGAGTGAAAGGAAAACTGAAGGTTACGCGTGCTTTGGGAGTTGGCTACTTGAAAAAGAAAAATCTTAATGATGCTTTGATGGGAATCCTTCGAGTTTCTGATCTTAAAAGCCCGCCATATATTTCAACTGATCCATCACTGAATGTGCATAGAATCTCAAATTCTGATCGATTTGTTATAATCGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAAGCAGTGAAGCTTGTAGAGTCTTATATGTTGAACAACCCTTTTGGTGATCCAGCAAAGTTTCTTGTTGAACAACTAGTAGCAAGAGCAGCTGATTCTGCAGGTTTCAGCATGGAAGAGTTGATGAATATTCCTGCTGGTAGGAGGAGAAAGTACCATGATGATGTAACCGTAATTGTGATCATTCTAGGGATGAATCAACGTACTTCAAAGGCATCAATTTGCATCTAA 1569 0.4092 MSMLSPEGELKISFGYQCNSDGAIPCKVANGYTILPEVRRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPNSFRRVPSSPSFPKLDILSSSLHSNMSNLSCSPSTPSSMLEYDPCTLKSTSAPSRSESFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTFISYFNMLCWDLESDSTKASNNVGLGGSFQYKLDDGLILHEHQSSSRFEGDNNSSLNISPPAKSETSCKSFSHAVLDSLQHVLSQVENDFLYMVEQEMEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSRAVLATCGTDDRLNGIESLKAIQLTDSHTLDNEAERAQLLANHPDDPKTIVAGRVKGKLKVTRALGVGYLKKKNLNDALMGILRVSDLKSPPYISTDPSLNVHRISNSDRFVIIGSDGLFDFFSNDEAVKLVESYMLNNPFGDPAKFLVEQLVARAADSAGFSMEELMNIPAGRRRKYHDDVTVIVIILGMNQRTSKASICI 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3069g00008 522 ProSiteProfiles PPM-type phosphatase domain profile. 138 509 IPR001932 -
Gabi3069g00008 522 PANTHER PROTEIN PHOSPHATASE 2C 143 507 IPR015655 GO:0004722|GO:0006470
Gabi3069g00008 522 CDD PP2Cc 151 509 IPR001932 -
Gabi3069g00008 522 Gene3D - 112 518 IPR036457 -
Gabi3069g00008 522 Pfam Protein phosphatase 2C 270 463 IPR001932 -
Gabi3069g00008 522 SMART PP2C_4 129 507 IPR001932 -
Gabi3069g00008 522 FunFam Probable protein phosphatase 2C 40 119 518 - -
Gabi3069g00008 522 SUPERFAMILY PP2C-like 151 510 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3069g00008 Gabi-Chr3069 108654 114420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3069g00008 6 522 PP2C-type Phosphatase Gene Family AT3G16560 61.759 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3069g00008 - - gmx:100791404 819.69