Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3063g00002 ATGGTTCGCTCCAATGGCGTTAGGCTCCTTAGATCTCTGCCTGTAAAACTCTTACTTGAATCTCAGATATATGAATCAGTATTCCAATGGGGTTATAGGACATTGAAATCAGGAGGACTTTGCAATCCGTCCAGTATTACCGGAAAATTTTCTCCTAATGTAGATGGTAATAATTTGAAGAACTGGTTGCTATTGGGAGCTGCAAATACATATTGGGGAGCATCCAGATCCATTCATGGCTCAGCATTGTTGGCAAGAGATTACTATGATGTGCTTGGTGTGAGTAAGAATGCAAGTGCTTCTGAAATAAAGAAAGCTTACTATGGGCTTGCAAAGAAGCTCCATCCAGACACAAACAAAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTTCAATGGCATATGAGGTTTTAAAGGACGAGGACAAACGTCAACAGTATGATCAGGTTGGACATGATGCTTATGTAAACCAACAAAGCACTGGTTTTGGAGGCAACAGTGGCTTTAATCCATTTGAGCAGATATTTCGTGATCATGATCTTTTCAAGAGTTTTTTTCGTCAGAATATTGGTGGAGAGGATGTTAAGACTTTCATTGAACTATCCTTTATGGAAGCTGTCCAAGGATGCACAAAAACTGTTACATTTCAGACAGATGTGCTTTGTAACACTTGTGGTGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACCTGCAAGCGCTGTAAAGGCTCAGGAGTGACATTTGTACAAGCTGGCATATTTAAGATGGAGAGTACTTGTGGTACATGTAAGGGAACTGGAAGAATTGTATCGAATTTCTGCAAGTCGTGCAGTGGTGCGAAGCTTATCAAAGGAACAAAGTCAGTCAAGTTGGATATTATGCCTGGCATGGACAACAATGAGACCATAAAGGTTTATAGAAGTGGTGGTGCAGATCCTGATGGAGATCACCCCGGTGATCTTTATGTTACTATCAAGGTCAGGGAAGATCCTGTCTTCCGGAGAGAAGGATCTAATATTCACGTAGATGCTGTTTTAAGTATCACTCAGGCAGTTTTGGGCGGAACCATTCAGGTCCCAACTCTTACTGGAGATGTTGTTCTTAAGGTTCGTCCTGGGACCCAACCTGGTCAGAAGGTGGTTTTGAAAAAGAAAGGGATCAAGTCAAAAAATTCTTACACATTCGGGGATCAATACGTTCATTTTGATGTCAGCATCCCAACAAATCTGACAGAGAGACAGCGTGAATTGATTGAAGAGTTTGCCAAGGAAGAGCAAGGGGAATTTGATAAGGAGAGAGCTGCTTCTGCTTCTGGTTGA 1326 0.4193 MVRSNGVRLLRSLPVKLLLESQIYESVFQWGYRTLKSGGLCNPSSITGKFSPNVDGNNLKNWLLLGAANTYWGASRSIHGSALLARDYYDVLGVSKNASASEIKKAYYGLAKKLHPDTNKDDPEAEKKFQEVSMAYEVLKDEDKRQQYDQVGHDAYVNQQSTGFGGNSGFNPFEQIFRDHDLFKSFFRQNIGGEDVKTFIELSFMEAVQGCTKTVTFQTDVLCNTCGGSGVPPGTRPETCKRCKGSGVTFVQAGIFKMESTCGTCKGTGRIVSNFCKSCSGAKLIKGTKSVKLDIMPGMDNNETIKVYRSGGADPDGDHPGDLYVTIKVREDPVFRREGSNIHVDAVLSITQAVLGGTIQVPTLTGDVVLKVRPGTQPGQKVVLKKKGIKSKNSYTFGDQYVHFDVSIPTNLTERQRELIEEFAKEEQGEFDKERAASASG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3063g00002 441 SMART dnaj_3 86 144 IPR001623 -
Gabi3063g00002 441 SUPERFAMILY Chaperone J-domain 86 187 IPR036869 -
Gabi3063g00002 441 SUPERFAMILY HSP40/DnaJ peptide-binding domain 193 331 IPR008971 GO:0006457|GO:0051082
Gabi3063g00002 441 Hamap Chaperone protein DnaJ [dnaJ]. 84 437 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Gabi3063g00002 441 Pfam DnaJ central domain 223 283 IPR001305 GO:0031072|GO:0051082
Gabi3063g00002 441 PRINTS DnaJ domain signature 89 107 IPR001623 -
Gabi3063g00002 441 PRINTS DnaJ domain signature 107 122 IPR001623 -
Gabi3063g00002 441 PRINTS DnaJ domain signature 144 163 IPR001623 -
Gabi3063g00002 441 PRINTS DnaJ domain signature 124 144 IPR001623 -
Gabi3063g00002 441 Gene3D - 196 325 - -
Gabi3063g00002 441 Pfam DnaJ domain 87 149 IPR001623 -
Gabi3063g00002 441 FunFam Molecular chaperone DnaJ 215 288 - -
Gabi3063g00002 441 Gene3D - 223 283 - -
Gabi3063g00002 441 FunFam Chaperone protein dnaJ 1, mitochondrial 330 436 - -
Gabi3063g00002 441 ProSitePatterns Nt-dnaJ domain signature. 129 148 IPR018253 -
Gabi3063g00002 441 CDD DnaJ_C 194 412 - -
Gabi3063g00002 441 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 59 434 - -
Gabi3063g00002 441 FunFam Chaperone protein dnaJ GFA2, mitochondrial 84 195 - -
Gabi3063g00002 441 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 285 IPR036410 -
Gabi3063g00002 441 Gene3D - 330 438 - -
Gabi3063g00002 441 Pfam DnaJ C terminal domain 199 409 IPR002939 -
Gabi3063g00002 441 Gene3D DnaJ domain 84 195 IPR036869 -
Gabi3063g00002 441 ProSiteProfiles Zinc finger CR-type profile. 210 288 IPR001305 GO:0031072|GO:0051082
Gabi3063g00002 441 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 420 IPR008971 GO:0006457|GO:0051082
Gabi3063g00002 441 CDD DnaJ_zf 223 283 IPR001305 GO:0031072|GO:0051082
Gabi3063g00002 441 ProSiteProfiles dnaJ domain profile. 87 152 IPR001623 -
Gabi3063g00002 441 CDD DnaJ 87 141 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3063g00002 Gabi-Chr3063 13945 37695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3063g00002 86 149 C2H2 Transcription Factor Family AT1G74250 43.478 1.47e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3063g00002 K03686 - gmx:100784630 769.615