Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi305g00014 ATGGCATCTTCTTCTGGTAGCTTAGACACCTCTGCAAACTCTTACAACAACTTCACCTTCTCAACACACCCTTTTATGACCACATCTTTTTCTGACCTTCTTGCTTCTCCTATAGATGACAAGCCTCGTGGCTTGTCAGATCGTATAGCTGAGAGAACTGGGTCTGGTGTCCCAAAATTCAAGTCTATTCCACCTCCTTCTTTGCCTCTATCTCCTCCTCCTATTTCTCCTTCTTCTTACTTTGCTATTCCACCTGGGTTGAGCCCTGCTGAGCTTCTTGACTCACCGGTTCTCCTTAACTCTTCTAACATTTTGCCATCTCCAACAACTGGAGCATATGCTGCTCAGAGCTTCAATTGGAAGAGCAATTCTGGGGGAAACCAGCAAATTATCAAAGAAGAAGACAGAAACTTCTCAAATTTCTCTTTTCAAACACAACCAGGACCTACTGCGACATCTTCAGCAACATTTCAATCTTCAAATGTCACAGTTCAAACACAACAGCCATGGAGTTTTCAGGAAGCCACCAAACAGGATAGTTTTTCTTCAGGGAAGAGTATGATGAAAACTGAAAACTCTTCTTCGATGCAGAGTTTTTCCCCTGAGATTGCTAGTGTCCAAACAAACCATAACAATGGGTTTCAATCGGATTATAGCAATTACCAACCACAAGCTCAGACCTTAAGCAGAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGGCAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTACTATAAATGCACATACCCCAATTGCCCTACAAAGAAGAAGGTTGAAAGGTCTATAGATGGACAAATTACTGAGATAGTTTACAAGGGTACTCATAACCATCCAAAGCCTCAATCAACTAGGAGAAACTCATCATCTTCCTCTTCTGTTGCAATCCCTCCTTCAAATCCCATCAACACTGAAATCCCAGATCAATCATATGCCACCCACGGCAGTGGGCAAATGGATTCAGTTGCCACCCCAGAGAACTCATCAATATCAATGGGGGATGATGATTTTGAACAGACTTCCCAAAAGTGTAAATCAGGAGGAGATGAGTTTGATGAAGATGAACCTGATGCCAAAAGATGGAAAATTGAAGGTGAAAATGAGGGTATATCAGCTGCTGGTAGTAGAACAGTGAGAGAACCCAGAGTTGTTGTTCAGACAACCAGTGACATTGATATCCTAGATGATGGGTACAGATGGAGGAAATATGGGCAGAAAGTAGTCAAGGGCAATCCAAATCCAAGGAGTTACTACAAGTGTACGCACCCAGGATGTCCAGTGAGGAAGCATGTAGAGAGAGCCTCACATGACCTAAGGGCTGTGATCACAACCTATGAGGGAAAGCACAACCATGATGTCCCTGCAGCCCGTGGCAGTGGCAGTCATTCTATCAACAGACCACTACCAAACAACACTGCAAACCCCACCAATGCAGCCACTGCCTTAAGGCCCTCGGCAATGACCCACCACACAAACAATTCTTTTCAGAATCAAAGACCACAAGCATCAGAAGGGCAATCACCCTTCACCCTAGAGATGCTGCAGAGCCCAGGAAGTTTTGGATTCTCAGGGTTTGGTAACCCAATGGGGTCTTACATGAATCAGCAACAACTATCTGATAATGTGTTTTCCTCCAGGGCCAAGGAAGAGCCCAGAGATGACTTGTTCCTTGATTCTTTGCTATGCTGA 1719 0.4392 MASSSGSLDTSANSYNNFTFSTHPFMTTSFSDLLASPIDDKPRGLSDRIAERTGSGVPKFKSIPPPSLPLSPPPISPSSYFAIPPGLSPAELLDSPVLLNSSNILPSPTTGAYAAQSFNWKSNSGGNQQIIKEEDRNFSNFSFQTQPGPTATSSATFQSSNVTVQTQQPWSFQEATKQDSFSSGKSMMKTENSSSMQSFSPEIASVQTNHNNGFQSDYSNYQPQAQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIDGQITEIVYKGTHNHPKPQSTRRNSSSSSSVAIPPSNPINTEIPDQSYATHGSGQMDSVATPENSSISMGDDDFEQTSQKCKSGGDEFDEDEPDAKRWKIEGENEGISAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSINRPLPNNTANPTNAATALRPSAMTHHTNNSFQNQRPQASEGQSPFTLEMLQSPGSFGFSGFGNPMGSYMNQQQLSDNVFSSRAKEEPRDDLFLDSLLC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi305g00014 572 MobiDBLite consensus disorder prediction 473 488 - -
Gabi305g00014 572 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 SMART WRKY_cls 404 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 SUPERFAMILY WRKY DNA-binding domain 231 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 SUPERFAMILY WRKY DNA-binding domain 396 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 Gene3D WRKY domain 218 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 MobiDBLite consensus disorder prediction 36 71 - -
Gabi305g00014 572 MobiDBLite consensus disorder prediction 211 236 - -
Gabi305g00014 572 ProSiteProfiles WRKY domain profile. 399 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 MobiDBLite consensus disorder prediction 282 378 - -
Gabi305g00014 572 MobiDBLite consensus disorder prediction 348 376 - -
Gabi305g00014 572 MobiDBLite consensus disorder prediction 287 347 - -
Gabi305g00014 572 MobiDBLite consensus disorder prediction 460 488 - -
Gabi305g00014 572 Gene3D WRKY domain 391 457 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 93 499 IPR044810 GO:0003700
Gabi305g00014 572 FunFam WRKY transcription factor 222 292 - -
Gabi305g00014 572 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 Pfam WRKY DNA -binding domain 405 461 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 MobiDBLite consensus disorder prediction 211 232 - -
Gabi305g00014 572 FunFam WRKY transcription factor 33 391 457 - -
Gabi305g00014 572 ProSiteProfiles WRKY domain profile. 233 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00014 572 MobiDBLite consensus disorder prediction 168 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi305g00014 Gabi-Chr305 133362 136333 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi305g00014 57 571 WRKY Transcription Factor Family AT2G38470 46.629 9.81e-120 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi305g00014 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi305g00014 K13424 - gmx:100127393 965.681