Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi305g00009 ATGCTTAACGGAATTTCCAATCGTTTAAATCAGAAAAAGCTATGGAGAGTTGTGGGATTTATGTCAAGCATCGTTGGACTGCTCTGCTATGCATTGAGCTCCTCTTTCAAACATCTATTTGGAGAGTTGAACTTCCTCAAGATCATCCTTTACACCGTCGTAAGTTTCATAATCAGCAACATGATGTTATTTTTGAAGAAATGGAAACTTTCGAGGAGTTTCTTACAGAAAGCTCATGTGGGTGTTCTTGTTTTGTTGCTCACCTCTTTGTATTCGTTTGAAATTGATAAAGCTGTGAATGGAAAACCAGACCTATTAAGTCTGATTTCGAGTGCAGCCTTTGCTTTAATGTCTTTGTGCCTGTCAAAACAGATTAACCTTGGGTTTGAAACGGATCTCCTCAATTTCTTCCTTGGATGTCTAACTGTTCAACTCATGAAGATAAACTTGATTCTCTGTATCATTACAGCCATATTCAGCTATTCCCTCATGGTTCTTTATTCCAAATTGGGTTCTCAATCAGAGATTGGAACTCTAGAAATGGATAATCATGTGATCGTAGAAATTGATGCTGCAGATGGAGTAGAAAGAGGAGGTGATGACAATAGAAGTAAATTCCAATTTGATCATACCAATGGCAGCCAACAAATTGAGGGGTTAAGAAGAAGGCAAGATGATGGGTACAATTGGAGAAAATATGAAGAGAAACAAGTGAGAAGAAGTGAGAATAAGAGAAGCTACTACAAATGCACATACCCCAATTGCTCTGTGAAGAAAAAAGTTGAAAGAGATGTAAATGGGCAAATTATTGAGATACTCTACGAGGGTACCCATGTCCATTGGAAGCCTGAGCATACAGTGAAGAGGAACTCATCATTTGAATATCTTTATTCACTTCTACCTTCAGAGCCTGTCCTCACTGACATGCCAGATCAATCATTTGCCTCCCATGGCAGTGGACAATTGGATTATGATGCAACATCTGAGAAATCCTCAGTATCAATATGA 1008 0.3849 MLNGISNRLNQKKLWRVVGFMSSIVGLLCYALSSSFKHLFGELNFLKIILYTVVSFIISNMMLFLKKWKLSRSFLQKAHVGVLVLLLTSLYSFEIDKAVNGKPDLLSLISSAAFALMSLCLSKQINLGFETDLLNFFLGCLTVQLMKINLILCIITAIFSYSLMVLYSKLGSQSEIGTLEMDNHVIVEIDAADGVERGGDDNRSKFQFDHTNGSQQIEGLRRRQDDGYNWRKYEEKQVRRSENKRSYYKCTYPNCSVKKKVERDVNGQIIEILYEGTHVHWKPEHTVKRNSSFEYLYSLLPSEPVLTDMPDQSFASHGSGQLDYDATSEKSSVSI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi305g00009 335 SMART WRKY_cls 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00009 335 MobiDBLite consensus disorder prediction 312 335 - -
Gabi305g00009 335 ProSiteProfiles WRKY domain profile. 225 283 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00009 335 Gene3D WRKY domain 213 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi305g00009 335 SUPERFAMILY WRKY DNA-binding domain 224 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi305g00009 335 FunFam WRKY transcription factor 212 284 - -
Gabi305g00009 335 MobiDBLite consensus disorder prediction 310 335 - -
Gabi305g00009 335 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 210 302 IPR044810 GO:0003700
Gabi305g00009 335 Pfam WRKY DNA -binding domain 225 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi305g00009 Gabi-Chr305 81102 82518 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi305g00009 212 284 WRKY Transcription Factor Family AT2G38470 61.644 3.09e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi305g00009 WRKY 4.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi305g00009 - - ccaj:109792596 431.024