Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi305g00008 ATGGCTGAAAACGGCGAAGAGAAATTACTGGCTGTGGCGCGGCACATAGCGAAAACGCTGGGCCACAACAACAACATGGCTGATGATATTCTTCAAATATTCTCCAACTTCGATGGAAGGTTCTCGAAGGAGAACCTGTCAGAGAAGGTTGCAGATGCTGATCCCAGGGCCTGCGCCGTACTGGATCACTCCCTCAAGTCACTTGACCTCCGGATCTCTCACTACGTCTCCTCCGACCGCCCTATCTGGGCGGATTCGGCCGACGCCGCTGCTTTCCTCGACGCCGTCGACGACCTCATCGCCACTGTCTCCGAGTGGAACCACCTTGCCTCCGACAAGGCCGTCGCCGCGTGCCTCGTCCGCGCTGAGGACATGCTCCAGCACGCCATGTTCCGCCTCGAGGATGAGTTCCGATCCCTCATGGAGCGCGGCGGCGAGTCGTTCGACCTAACTCGGCCGTACCGGAACGGCGAGTCAACGGAGAACTTACCGTTTGACTCGGAGGAAGAGGATGAAGAAGTTGACGAAGAAGCCAGGAACGGAGGAGGAGAAGCGGAGGAATTGATTCCTGTGGCGTTGCCGGTCACCGACTACGACATCGTGATCGATGCGCTTCCGTCGGGGACGATCAACGACCTTCACGAGATCGCAAAGCGCATGGTTGCAGGAGGGTTCGGGAAGGAGTGCTCGCACGTGTACAGCAGTTGCCGAAGGGAGTTCTTGGAGGAAAGCCTGTCGAGATTAGGGTTACAGAAGCTAAGCGTCGAGGACGTTCACAAGATGCCATGGCAGGAACTCGAAGACGAGATTGAAAGATGGATTAAGGCTTCCAACGTCTCTCTAAAGATACTGTTCCCTAGCGAGCGGCGACTCTGCGACCGCGTATTCTTCGGGTTCTCTTCTGCTGCTGACTTCTCTTTCATGGAGGTTTGCAGGGGATCGACAATTCAGTTGCTGAATTTCGCCGATGCCGTCGCTATTGGGAGCCGTTCGCCGGAGCGATTGTTCAAGATCCTTGATGTGTTCGAGACATTGCGTGACTTAATTCCTGAGTTTGAGTCTCTGTTTTGTGATCAGTACAGTGTGTCGCTCAGGAACGAAGCAATCACAATTTGGAAGAGGTTGGGGGAAGCAATCAGAGGAATTTTCATGGAGTTGGAGAATCTGATTCGCCGTGATCCGGCAAAGTCGGCGGTTCCCGGTGGTGGACTTCATCCAATTACTCGCTACGTGATGAACTACCTTCGTGCAGCTTGCCGGTCACGGCAGGCCCTGGAGCAAGTGTTTGAAGACTATGGGTTTCCGTTGAGAGAATACCCCAAGCTTGATGATAGAGTTCCGCCCTCTTCTTCTCTGTCAGTGCAAATGGATTGGATAATGGAGCTTTTGGAGAGCAATTTGGAAGCAAAATCCAAAATCTACAAAGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAACGGCAGGTACATAGTTCAGAAGACCAAAGATAGTGAATTGGGAACCCTTTTGGGTGATGATTGGATCCGAAAACACACTGCAAAAGTTCGGCAATACCATGTGCACTATCAAAGAAGCTCATGGAATAAGGTGCTGGGGTTTCTGAAGCCTGACAGCAATGGATCAGTGCCGCCTAATGTCGCAGCTAAGTCTATGAGAGAGAAGCTCAAGTCGTTTAACATGCTGTTTGGGGAAATATGCAGGGTTCAGTCTTCATGGTTTGTCTATGATGAACTGCTTAGGGAAGATATAAGAATTTCCCTTGAGAAAATTTTGTTGCCAGCTTATGGAAACTTCATTGGGAGGTTCCAGAGTATTCCAGAACTTGGTAAGCATGCTGATAAGCATATTAAGTATGGAACGGAGGACATTGAAGCACGACTCAATGATTTGTTTCGGGGAAGCACTGGATCAAGTGCTAGCCGAAAGTGA 1932 0.5093 MAENGEEKLLAVARHIAKTLGHNNNMADDILQIFSNFDGRFSKENLSEKVADADPRACAVLDHSLKSLDLRISHYVSSDRPIWADSADAAAFLDAVDDLIATVSEWNHLASDKAVAACLVRAEDMLQHAMFRLEDEFRSLMERGGESFDLTRPYRNGESTENLPFDSEEEDEEVDEEARNGGGEAEELIPVALPVTDYDIVIDALPSGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESLSRLGLQKLSVEDVHKMPWQELEDEIERWIKASNVSLKILFPSERRLCDRVFFGFSSAADFSFMEVCRGSTIQLLNFADAVAIGSRSPERLFKILDVFETLRDLIPEFESLFCDQYSVSLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKSAVPGGGLHPITRYVMNYLRAACRSRQALEQVFEDYGFPLREYPKLDDRVPPSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKTKDSELGTLLGDDWIRKHTAKVRQYHVHYQRSSWNKVLGFLKPDSNGSVPPNVAAKSMREKLKSFNMLFGEICRVQSSWFVYDELLREDIRISLEKILLPAYGNFIGRFQSIPELGKHADKHIKYGTEDIEARLNDLFRGSTGSSASRK 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi305g00008 643 MobiDBLite consensus disorder prediction 163 180 - -
Gabi305g00008 643 Pfam Exo70 exocyst complex subunit 271 630 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi305g00008 643 PANTHER EXOCYST COMPLEX PROTEIN EXO70 49 634 IPR004140 GO:0000145|GO:0006887
Gabi305g00008 643 SUPERFAMILY Cullin repeat-like 83 632 IPR016159 -
Gabi305g00008 643 Gene3D Exocyst complex component Exo70 82 642 - -
Gabi305g00008 643 FunFam Exocyst subunit Exo70 family protein 75 640 - -
Gabi305g00008 643 MobiDBLite consensus disorder prediction 149 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi305g00008 Gabi-Chr305 75587 77986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi305g00008 1 636 EXO70 exocyst subunit family AT5G58430 70.173 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi305g00008 K07195 - gmx:100803694 1084.32