Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi305g00005 ATGGAGAATAGTGGGATTAGTGTCAAGTGTCATTGGGATGCTGTGTTACGCGTGGAGCCTATCTTCAAAAAATGTGGATGGAAAGTATCACGTTTTGAAGATCTCTCTTTACGGTGTGATATCGAACTAGAGATTGGAACTGCTAGTCATGAAGAGCATGTGGCTATTCAAATTGATACTGGTAAGGGAGAAGAAAGAGAAGCTGACACAGATCACACAAGCCAACTCTATTTGCTTCTGGGAATTGAGATAAAAAATGAGGAGACAGTTATGTATCCTCATGACTTTGAAGCCAAACTTATGGAGGCAATGGCTTCGGGTTTTGTGAAGGAGCACTGCTACCATGTTTTCTGCTGTTGGCGAAGACAAGTCTTGGAGGAGGAGTTGTTGTTAAAGGACCTAAAGAGCATCGAAGAGGTTCACATGATGCCATTGAAACATCTCAAAGATGAAGTTGGACGCTGGATTAAAGCTTCCAAGGATGCTTTCGGGGAATTGTTTCCTAACGAACAACATCTCTGCAATCGTGTCTTTGAGTTCTCTCCTTTTGCTGATCGCTCTTTCATGGAGGTTTGTCATGAACCCAGCATTCTTCTACTGAATTTCTTCGCTAATGCCGTGGCTAGTACAAGCCGTTCACCACAGCGTTTGTTCATAATGCTTTTCGTGTTTGAGACACTGAATGAACTCTTACCTAACTTGGAGTCAATGTTCTCAGGTAAAGAAGGTTGTGTGGTTCTCAATGAGGCAAATAGAATCTGTAAAAGGTTAAGAGAAGCAATAAGAGGAGTTTTCTTGGAGATGGAAAATCTGATTCGTCAAGACCCGGCAAAGGTGGTTGTTTCCGGTGGTGGGCTTCATCCAACTAACCGCTATGTGATGAACTACCTCTTTGTTGCTTGTGATTGTTGGAAGACCCTTGAGCTTGCTTTTAACGATGAAGGGTCACTTCCTTGTTCTTCATTGTCTCTCCAGGTGACTCAAGTTTTGGAGTTGTTGGAGAGCAATTTGAAAGCCAACTCCAAGATCTACAAAGACTCTTCCATGAGCTCTATCTTCATGATGAACAATTGGATGTACATGGTTCACAAGGTGAAAAAGTGTGAGCTAGGAAAAGTGTTGGGTGATGAATGGATCCAGAAACACATAGTGAAAATGCGGCAATATCTTGTACACTACCAGAGAAGCTCATGGGACCAGATACATGGTATGTTGAATATAGACAATAATGAGTCACTGGCACATGATGAATCTGCAGTGTCATGGAAAGAAAAGCTCGAGCTTTTTAAGAGGAAATTTGAGGAGATATGTCTGAATCAGTCTACATGGGTTGTCATTGATGACCACCTAAGAGAAGTCATGAAAAGTTCATTGAAGAAAAACTTGTTGCCGGCGTTTGAAAATTTCATCGCAAGATTCCAAAATGCAATAAATCCTCGAGAAAATATGGATATGCATGAGGAGTTTGGGGCCCAAGGTGTTGCGACTCATATAGACAAGCTGTTCCAGGGAAAAGATGAGCACAGAAACCCCAGAACTATTCAGCCAACATGGAACGTAGTCCTGCGCAGTACACAAGATTTTTATGAATGGAGGAAGTGCGCTGAGAAGACAATCGTTAATTCTTCATACCCAAGAAAATACTACAGATGCATCTGCAGGAATGATCAAGGTTGTCGAGCAAGAAAACACGTCCAACAAATACAAGAGAATCCAAAGCTGTACATGACTAACTACTCCGGCTTCCATACATGCAGTGTGCTCTATATGCTTCACAATGCTCCGTAA 1788 0.42 MENSGISVKCHWDAVLRVEPIFKKCGWKVSRFEDLSLRCDIELEIGTASHEEHVAIQIDTGKGEEREADTDHTSQLYLLLGIEIKNEETVMYPHDFEAKLMEAMASGFVKEHCYHVFCCWRRQVLEEELLLKDLKSIEEVHMMPLKHLKDEVGRWIKASKDAFGELFPNEQHLCNRVFEFSPFADRSFMEVCHEPSILLLNFFANAVASTSRSPQRLFIMLFVFETLNELLPNLESMFSGKEGCVVLNEANRICKRLREAIRGVFLEMENLIRQDPAKVVVSGGGLHPTNRYVMNYLFVACDCWKTLELAFNDEGSLPCSSLSLQVTQVLELLESNLKANSKIYKDSSMSSIFMMNNWMYMVHKVKKCELGKVLGDEWIQKHIVKMRQYLVHYQRSSWDQIHGMLNIDNNESLAHDESAVSWKEKLELFKRKFEEICLNQSTWVVIDDHLREVMKSSLKKNLLPAFENFIARFQNAINPRENMDMHEEFGAQGVATHIDKLFQGKDEHRNPRTIQPTWNVVLRSTQDFYEWRKCAEKTIVNSSYPRKYYRCICRNDQGCRARKHVQQIQENPKLYMTNYSGFHTCSVLYMLHNAP 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi305g00005 595 SUPERFAMILY WRKY DNA-binding domain 523 586 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi305g00005 595 Gene3D Exocyst complex component Exo70 69 512 - -
Gabi305g00005 595 Pfam Exo70 exocyst complex subunit 154 475 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi305g00005 595 Pfam WRKY DNA -binding domain 527 585 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00005 595 Gene3D WRKY domain 517 587 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi305g00005 595 SUPERFAMILY Cullin repeat-like 100 502 IPR016159 -
Gabi305g00005 595 PANTHER EXOCYST COMPLEX PROTEIN EXO70 101 503 IPR004140 GO:0000145|GO:0006887
Gabi305g00005 595 ProSiteProfiles WRKY domain profile. 527 588 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi305g00005 595 SMART WRKY_cls 525 587 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi305g00005 Gabi-Chr305 52713 58360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi305g00005 104 509 EXO70 exocyst subunit family AT5G58430 49.029 6.54e-121 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi305g00005 Exo70 6.2e-85 CL0295