Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3059g00001 | ATGGATGATGTAGCAGGCCTAGCTGAGGCAGCAGGATCAAGATTCAGTTCATTGGAGCTTATTGGGCAGGGTTCATTTGGACACGTCTATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCCATAAAAGTGATCGATTTGGAAGAATCAGAGGATGAAATTGAGGATATTCAGAAGGAAATTGCTGTTCTGTCACAATGCCGATGTCCATACATTACCGAGTATTATGGTTCCTTTCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCTCTTGATGAAATGTCAATTGCTTGCATTCTACATGACTTGCTGCGTGCGATTGATTACCTACATAGCGAAGGAAAAATTCACAGAGACATTAAAGCTGCTAACATTTTGTTGAGTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCACCTGAGGTTATTCAGAATTTAGATGGATATAATGAAAAGGCAGATATCTGGTCTCTGGGGATCACTGCAATTGAGATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCACCCCATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCTCCACAGCTAGATGACCATTTTTCTCGTCCCATGAAAGAATTTGTTTCATTGTGTTTGAAAAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTTCAGAAAGAATACGGGGGCGTCCAAAAAACCAAATAAAGGAAGATCTGGGGACACCTAGAAATGGCCCAAGAGGGATAGGGGAGGCATCGGATACCGTGAAGGTGGTGAGAGATTTAAGAGGTGAAGAAACTGATCGACCCAGTGGTCAGGATAAAACCCTGAAAAGCTCTGAATGGGACTTCAGCATTGATGGGTCACAGGGTACTGGAACAGTTCGTAGTGTTTCACGACCACCTCAGTTTAGAGATAAAAAGACTGAAGTTTCACATAATCAGCTTACCCAAAGAAAAGCTCCAGAGAGTGGCTACCGAGGGGGATCTGCCAATAGAAGTGCACTTAATGAGTCACTTGAAAGTTCCTTTGGAAGAAATCTAAGAGTTCCTCACCACGATGAGCATCTGGATACTCACCCTGAAGATGATGAATTGTCTGGTAATGGATTAGGAACTGTTGTTATTCGATCTCCAAAAGGAACAAAACCATCTGTGTATCGTGACCAAAGCTCTCAGTCTAGCAGCAGCTATGCTTCTTTTGAAGATGCTTCCTCGAGTGGAACTGTTGTTTTGCGTACCCAACATGATGATCCTGATTCTCCACAGACACCAAGGTCTCGACTAGGAATTCATGACCGAAATTCAAATTCCTTACTGGAAGATAGTGCTTCAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGAGGGCTAAGGAAAGTGAATGCTCGAGAGAGATTTTCCCGGGGAAAATCCAACGATATACAGGAAAGCAAGAGAGACCAGATGACTAGCAACTCTGATTCTTCAAGATCATATCGTGATTATGTTGATGCACAAAAGGGCATGTTAAGATCACATTATGCTAGTGATGATGAAGAAAGTGTTAAAATAATGTCATCATCAGTGCCGTTATCAGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCGGATGATCCAGAAGGGCCAATCGTACGGGCAGTTATCAATTCTTTCATAAACATGGAGGGAACAAAGCCTAGATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCACAGGAAGATTCATTAAAGGATCTGCAGGGATTGGCAGGTCAACTATTCAGCCATACCAAGTCAGCTGAAGAAGCCAATAACCAGAAGAAACAACAGAACAAGGAACCTCATCCAAATAGCAATTTAAGCCCACTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCATACCTCACGGGATCTAAACCCATCTTGA | 2088 | 0.4286 | MDDVAGLAEAAGSRFSSLELIGQGSFGHVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEIAVLSQCRCPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILHDLLRAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNLDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDDHFSRPMKEFVSLCLKKVPAERPSAKELLKDRFIRNARKSPKLSERIRGRPKNQIKEDLGTPRNGPRGIGEASDTVKVVRDLRGEETDRPSGQDKTLKSSEWDFSIDGSQGTGTVRSVSRPPQFRDKKTEVSHNQLTQRKAPESGYRGGSANRSALNESLESSFGRNLRVPHHDEHLDTHPEDDELSGNGLGTVVIRSPKGTKPSVYRDQSSQSSSSYASFEDASSSGTVVLRTQHDDPDSPQTPRSRLGIHDRNSNSLLEDSASNLAEAKAAIQGGLRKVNARERFSRGKSNDIQESKRDQMTSNSDSSRSYRDYVDAQKGMLRSHYASDDEESVKIMSSSVPLSVLLIPSLKEAIADDPEGPIVRAVINSFINMEGTKPRSCDVLVKKLLQRLASSQEDSLKDLQGLAGQLFSHTKSAEEANNQKKQQNKEPHPNSNLSPLARFLLSRWQGHTSRDLNPS | 695 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 437 | 471 | - | - | |
Gabi3059g00001 | 695 | CDD | STKc_MST3_like | 13 | 281 | - | - | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 330 | 352 | - | - | |
Gabi3059g00001 | 695 | ProSitePatterns | Protein kinases ATP-binding region signature. | 21 | 44 | IPR017441 | GO:0005524 | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 650 | 677 | - | - | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 383 | 397 | - | - | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 272 | 290 | - | - | |
Gabi3059g00001 | 695 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 268 | IPR011009 | - | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 400 | 418 | - | - | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 516 | 531 | - | - | |
Gabi3059g00001 | 695 | PANTHER | STERILE20-LIKE KINASE, ISOFORM B-RELATED | 11 | 649 | - | - | |
Gabi3059g00001 | 695 | SMART | serkin_6 | 15 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 272 | 489 | - | - | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 516 | 547 | - | - | |
Gabi3059g00001 | 695 | Pfam | Protein kinase domain | 16 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi3059g00001 | 695 | Coils | Coil | 41 | 68 | - | - | |
Gabi3059g00001 | 695 | Gene3D | Transferase(Phosphotransferase) domain 1 | 12 | 294 | - | - | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 532 | 546 | - | - | |
Gabi3059g00001 | 695 | FunFam | serine/threonine-protein kinase dst1 isoform X1 | 12 | 300 | - | - | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 663 | 677 | - | - | |
Gabi3059g00001 | 695 | ProSiteProfiles | Protein kinase domain profile. | 15 | 267 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi3059g00001 | 695 | MobiDBLite | consensus disorder prediction | 307 | 329 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3059g00001 | Gabi-Chr3059 | 24117 | 37465 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3059g00001 | 1 | 692 | MAP Kinase Kinase Kinase Kinase | AT3G15220 | 64.173 | 0.0 | 837 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE20-YSK | Gabi3059g00001 | Pkinase | 9.4e-68 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3059g00001 | K08838 | - | gmx:100815042 | 1131.32 |