Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3059g00001 ATGGATGATGTAGCAGGCCTAGCTGAGGCAGCAGGATCAAGATTCAGTTCATTGGAGCTTATTGGGCAGGGTTCATTTGGACACGTCTATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCCATAAAAGTGATCGATTTGGAAGAATCAGAGGATGAAATTGAGGATATTCAGAAGGAAATTGCTGTTCTGTCACAATGCCGATGTCCATACATTACCGAGTATTATGGTTCCTTTCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCTCTTGATGAAATGTCAATTGCTTGCATTCTACATGACTTGCTGCGTGCGATTGATTACCTACATAGCGAAGGAAAAATTCACAGAGACATTAAAGCTGCTAACATTTTGTTGAGTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCACCTGAGGTTATTCAGAATTTAGATGGATATAATGAAAAGGCAGATATCTGGTCTCTGGGGATCACTGCAATTGAGATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCACCCCATGAGAGTGCTTTTCATCATACCCCGAGAGAATCCTCCACAGCTAGATGACCATTTTTCTCGTCCCATGAAAGAATTTGTTTCATTGTGTTTGAAAAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTTCAGAAAGAATACGGGGGCGTCCAAAAAACCAAATAAAGGAAGATCTGGGGACACCTAGAAATGGCCCAAGAGGGATAGGGGAGGCATCGGATACCGTGAAGGTGGTGAGAGATTTAAGAGGTGAAGAAACTGATCGACCCAGTGGTCAGGATAAAACCCTGAAAAGCTCTGAATGGGACTTCAGCATTGATGGGTCACAGGGTACTGGAACAGTTCGTAGTGTTTCACGACCACCTCAGTTTAGAGATAAAAAGACTGAAGTTTCACATAATCAGCTTACCCAAAGAAAAGCTCCAGAGAGTGGCTACCGAGGGGGATCTGCCAATAGAAGTGCACTTAATGAGTCACTTGAAAGTTCCTTTGGAAGAAATCTAAGAGTTCCTCACCACGATGAGCATCTGGATACTCACCCTGAAGATGATGAATTGTCTGGTAATGGATTAGGAACTGTTGTTATTCGATCTCCAAAAGGAACAAAACCATCTGTGTATCGTGACCAAAGCTCTCAGTCTAGCAGCAGCTATGCTTCTTTTGAAGATGCTTCCTCGAGTGGAACTGTTGTTTTGCGTACCCAACATGATGATCCTGATTCTCCACAGACACCAAGGTCTCGACTAGGAATTCATGACCGAAATTCAAATTCCTTACTGGAAGATAGTGCTTCAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGAGGGCTAAGGAAAGTGAATGCTCGAGAGAGATTTTCCCGGGGAAAATCCAACGATATACAGGAAAGCAAGAGAGACCAGATGACTAGCAACTCTGATTCTTCAAGATCATATCGTGATTATGTTGATGCACAAAAGGGCATGTTAAGATCACATTATGCTAGTGATGATGAAGAAAGTGTTAAAATAATGTCATCATCAGTGCCGTTATCAGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCGGATGATCCAGAAGGGCCAATCGTACGGGCAGTTATCAATTCTTTCATAAACATGGAGGGAACAAAGCCTAGATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCACAGGAAGATTCATTAAAGGATCTGCAGGGATTGGCAGGTCAACTATTCAGCCATACCAAGTCAGCTGAAGAAGCCAATAACCAGAAGAAACAACAGAACAAGGAACCTCATCCAAATAGCAATTTAAGCCCACTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCATACCTCACGGGATCTAAACCCATCTTGA 2088 0.4286 MDDVAGLAEAAGSRFSSLELIGQGSFGHVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEIAVLSQCRCPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILHDLLRAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNLDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDDHFSRPMKEFVSLCLKKVPAERPSAKELLKDRFIRNARKSPKLSERIRGRPKNQIKEDLGTPRNGPRGIGEASDTVKVVRDLRGEETDRPSGQDKTLKSSEWDFSIDGSQGTGTVRSVSRPPQFRDKKTEVSHNQLTQRKAPESGYRGGSANRSALNESLESSFGRNLRVPHHDEHLDTHPEDDELSGNGLGTVVIRSPKGTKPSVYRDQSSQSSSSYASFEDASSSGTVVLRTQHDDPDSPQTPRSRLGIHDRNSNSLLEDSASNLAEAKAAIQGGLRKVNARERFSRGKSNDIQESKRDQMTSNSDSSRSYRDYVDAQKGMLRSHYASDDEESVKIMSSSVPLSVLLIPSLKEAIADDPEGPIVRAVINSFINMEGTKPRSCDVLVKKLLQRLASSQEDSLKDLQGLAGQLFSHTKSAEEANNQKKQQNKEPHPNSNLSPLARFLLSRWQGHTSRDLNPS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 437 471 - -
Gabi3059g00001 695 CDD STKc_MST3_like 13 281 - -
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 330 352 - -
Gabi3059g00001 695 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 650 677 - -
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 383 397 - -
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 272 290 - -
Gabi3059g00001 695 SUPERFAMILY Protein kinase-like (PK-like) 12 268 IPR011009 -
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 400 418 - -
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 516 531 - -
Gabi3059g00001 695 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 649 - -
Gabi3059g00001 695 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 272 489 - -
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 516 547 - -
Gabi3059g00001 695 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3059g00001 695 Coils Coil 41 68 - -
Gabi3059g00001 695 Gene3D Transferase(Phosphotransferase) domain 1 12 294 - -
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 532 546 - -
Gabi3059g00001 695 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 663 677 - -
Gabi3059g00001 695 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3059g00001 695 MobiDBLite consensus disorder prediction 307 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3059g00001 Gabi-Chr3059 24117 37465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3059g00001 1 692 MAP Kinase Kinase Kinase Kinase AT3G15220 64.173 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Gabi3059g00001 Pkinase 9.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3059g00001 K08838 - gmx:100815042 1131.32