Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3058g00027 ATGGCCGTGGAAGCTGAGGCTGCCACCGCTCCTACGTTGGCGCTCGCCGATACAGATATCAACTGGGACAGGTTGGATAAGACCAAGTTTCATGTGATTGGTGCCATACTGTTTACTGCACAATCAGCATTGCTTCATCCAACGTCAGTGGTGAAGACAAGAATGCAAGTAGCTGGGTCTGGATTCTCTGACATGAGAGGAATGTCAGTGTTTGCTCACATTTTGAGGAGGGATGGTGTTCCTGGAATCTTTAGAGGTTTTGGCACTTCTGCCATTGGATCAGTGCCTGGTAGGGTCTTGGCTCTCACATCTCTCGAGATGTCAAAAGACGTTATGATGAAATACACTCAAGGTAGTGATATGCCAGAAGCATCACGTATTGGTCTTGCAAATGGGGTGGCTGGCATGTTGTCAAATCTGGTATCTTGTGTATACTTTGTGCCTTTGGATGTGATCTGCCAGAGGTTAATGGTACAAGGTCTTCCTGGAACTACATATTGTAGAGGACCATTTGATGTTATCCGTAAAGTTGTAAGGGCAGAGGGTTTTCGTGGCTTGTATAGAGGTTTTGGATTAACAGCTGTAACCCAGTCCCCAGCATCTGCACTGTGGTGGGGTTCATATGGTGCAGCACAACACATAATTTGGAGGAGTTTGGGCTACAAAGATGATATGGAGAACAAACCTTCACATGTGGAAATGGTGACAGTTCAGGCTACCGCAGGGATGGTGGCTGGTGCTTGTTCATCTGTTATCACTACTCCCATTGATACTGTAAAAACACGTCTTCAGGTTATGGACAACTATGGTTCTGGAAGACCATCAGTATTGAAGACAACCAAGACTCTCCTTAAGGAAGATGGATGGTGGGGATTTTACCGGGGTTTTGGACCTAGATTTTTAAATATGTCACTTTATGGAACAACGATGATTGTTACTTACGAACTGATAAAGAGATTATCAGTTCAACCAAGTTTGAGGCCTTTTGCTTAA 993 0.4471 MAVEAEAATAPTLALADTDINWDRLDKTKFHVIGAILFTAQSALLHPTSVVKTRMQVAGSGFSDMRGMSVFAHILRRDGVPGIFRGFGTSAIGSVPGRVLALTSLEMSKDVMMKYTQGSDMPEASRIGLANGVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCRGPFDVIRKVVRAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYKDDMENKPSHVEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTTKTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQPSLRPFA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3058g00027 330 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Gabi3058g00027 330 Gene3D Mitochondrial carrier domain 21 161 IPR023395 -
Gabi3058g00027 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 111 IPR018108 -
Gabi3058g00027 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Gabi3058g00027 330 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Gabi3058g00027 330 Pfam Mitochondrial carrier protein 33 115 IPR018108 -
Gabi3058g00027 330 Pfam Mitochondrial carrier protein 237 321 IPR018108 -
Gabi3058g00027 330 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Gabi3058g00027 330 Gene3D Mitochondrial carrier domain 162 329 IPR023395 -
Gabi3058g00027 330 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Gabi3058g00027 330 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Gabi3058g00027 330 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Gabi3058g00027 330 PRINTS Mitochondrial carrier protein signature 242 264 IPR002067 GO:0055085
Gabi3058g00027 330 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3058g00027 Gabi-Chr3058 236857 240187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3058g00027 17 320 Chloroplast and Mitochondria Gene Families AT5G15640 50.980 2.68e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3058g00027 K15121 - gmx:112997745 576.244