Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3057g00002 ATGGGAAAGAAATCATTGAAACTACTATCACTGTTCAAAACCAAGGAATCACCACCAAGTAAGCATCATCGATGGAAGTTGTTACCCTCTTGTGGCCAACAAAAGACCCTTCCTTTCAAAGCTGGTGATGACATCTTCAAGAAAGTTAACACTGTCTTCTTTGACCCTGATCATGAAATCAACACAGTTGAAACTACTCCCCATGAGTCCTGTTTCACAACCTCGTCTGAATCTGCAAGCTTCTCAGCAGACTCAGAACACAACTATGATGGTGAATCTTTGGAGATGTTCCTACGTGGGGTGAGGTCAGAGAGGCTGTTTTTTGAGCCTGGTAACACAAGCTCAATCTTGGAGAATGCTAATAAGGTTGGTGTGTTTCCATTCAAGGAAAGTGTGTTGCTAGCTATGGAGTCAGAGGATCCATATGAAGACTTCAAAAGGTCAATGGAGGAGATGATGGAGACTCATGGATTAAAGGATTGGAAGTGTTTGGAGGAGCTTTTGAGTGTGTATTTGAGGGTTAATGGTAAGAACAATCATGGGTTTATAGTGTTGGCTTTTGTTGATTTGCTACTTAGTTTAGCTGAAGAAGATTCTCGTGATTCTTGTTCTAATCATTCCACTTCATATGACTCAGCTGTTTCATCTTTTGCTTCTTCCCCATTGTATCTATCAGATGGTCAGAATGAGATTATTGACCAGCATGAAGATATAATAAGGTCTTAA 726 0.4036 MGKKSLKLLSLFKTKESPPSKHHRWKLLPSCGQQKTLPFKAGDDIFKKVNTVFFDPDHEINTVETTPHESCFTTSSESASFSADSEHNYDGESLEMFLRGVRSERLFFEPGNTSSILENANKVGVFPFKESVLLAMESEDPYEDFKRSMEEMMETHGLKDWKCLEELLSVYLRVNGKNNHGFIVLAFVDLLLSLAEEDSRDSCSNHSTSYDSAVSSFASSPLYLSDGQNEIIDQHEDIIRS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3057g00002 241 NCBIfam uncharacterized plant-specific domain TIGR01568 132 195 IPR006458 -
Gabi3057g00002 241 ProSiteProfiles OVATE domain profile. 134 193 IPR006458 -
Gabi3057g00002 241 Pfam Transcriptional repressor, ovate 138 194 IPR006458 -
Gabi3057g00002 241 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 194 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3057g00002 Gabi-Chr3057 37731 38456 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi3057g00002 Ovate 9.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3057g00002 - - gmx:100527123 281.182