Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3056g00034 ATGATTTGCATGGTGAAACAACCTGGTATATCTATCAGAGGTTCTGATGTTGTTTTTCGGAAAAAGGGTTCAAACCCAGTTCAGTCATGTTCCCTTGTTTTACCTTCCCTCCCGAGAGAAAAATTTCAGAGATCTCTGGTTTCAGTGCAAAAGCCACTGCACCTTTCTGCTGTTGGTGTTGGGAGTTTTAGTGGGTCAGTGAGAGGTGAAAGGAGTAATTTGGTAACATGTGGAGCGTATGAGGCAGATAGATCAGAGGTTGAAGGAGCTGGTACTCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATATACTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTCTGAATGCATACCCCTACCCTTGGCTTACTTCAACTCTCTCGCTTGCATGTGGGTCTCTTATGATGTTGATCTCCTGGGCCACCAGGATAGCTGAGGCACCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTCCCTGTTGCTGTTGCACATACAATAGGACATGTAGCAGCAACTGTTAGCATGTCAAAAGTTGCAGTGTCATTCACCCATATTATCAAGAGTGGCGAGCCTGCTTTCAGTGTACTGGTTTCCCGACTTATTTTGGGTGAGACCTTCCCAGTGCCAGTCTATCTGTCTTTAATTCCAATCATCGGAGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTATTCCGTAATATCTTTTCAAAAAAGGGAATGAAGGGGAAGTCTGTCAGTGGAATGAATTACTATGCTTGTTTATCTATTATGTCCCTGTTGATTCTCACACCGTTTGCAATTGCTGTGGAGGGACCACAGATGTGGGCAGCTGGATGGCAAACAGCCCTTTCTCAAATTGGACCCCAATTTATATGGTGGGTGGCAGCTCAGAGCGTATTTTATCATCTTTACAATCAAGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAGCGTATATCTGTTATAGTTTCTTCAATCATTATCTTCCATACACCTGTTCAGCCTGTCAATGCTCTTGGAGCTGCTATTGCCATCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAGTAG 1182 0.4332 MICMVKQPGISIRGSDVVFRKKGSNPVQSCSLVLPSLPREKFQRSLVSVQKPLHLSAVGVGSFSGSVRGERSNLVTCGAYEADRSEVEGAGTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRLILGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSIMSLLILTPFAIAVEGPQMWAAGWQTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3056g00034 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 236 - -
Gabi3056g00034 393 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 392 IPR004696 GO:0016020|GO:0022857|GO:0055085
Gabi3056g00034 393 Pfam Triose-phosphate Transporter family 101 389 IPR004853 -
Gabi3056g00034 393 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3056g00034 Gabi-Chr3056 246331 250627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3056g00034 18 392 Antiporters AT5G54800 79.328 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3056g00034 K15283 - gmx:100801832 649.818