Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3056g00012 ATGAGTGTTCTCCTAGTTAGTTTCCTCTTACTCATCCCAATTCTCCTTCTGCATAGAATAAGAAGAAAACCATCCAAAAGGGTCCCTCCTGGGTCACTTGGAATACCTATTATTGGTCAAAGCCTTGGCCTTCTTCGAGCTATGCGTGCAAACGTTGCAGAAAAATGGATTGAAGAAAGAACCAAGAAGTATGGTCCTATTTCAAAGCTAAGCCTCTTCGGAAAACCAACAGTTTTTATCTATGGACAGGCTGCGAATAAGTTAATATTCCAGAATAGTGGGAACACAATTGTTAACCAGCAAACACAGTCCATCAAAATGATCTTGGGTGACCGAAATTTGATGGAACTGAGTGGTGAAGATCACAGCCGAGTCAGAAATGCACTTGTCTCATTCTTGAAGCCAGAATCCTTGAAGCTGTATGTGGGAAAAATGGATGAAGAAGTTAAGAGGCACCTTGAAATGCATTGGCATGGGAAACAACAGATCAAGGTGTTACCCTTGATGAAGACTATGACATTCAACATAATTTGCTCTCTTCTGTTTGGTATTGAGCGTGGAAAACAAAGAGATGAATTCCTGGCTTGCTTCAAAGCGATGATGGGAGGAATGTGGTCAGTCCCAGTTAACGTGCCTTTCACACGTTACAACCGCAGCCTCAGAGCCAGTGCAAGGATCCAGAACATGATGGAGGAGATTGTGCACAAGAAGAAGATTGAACTCGAGCAAAATGGAGCCTCTGCTCACAAAGACTTAATTAGTTGCTTACTTGGCATGGTTGGTGAAGATGACAAACAAGTTATAACCGAGAAGGAAATCATTCACAATGTTAGGCTTGTCATGGTTGCCGGATATGACACTTCATCGGTTGTAATCACTTTCATTATCCGACTCTTATCTAATGAACCTGCTATTTATGCAGCAGTTCTTCAAGAACAGGAAGAGATAGCAAAAAGCAAGCCCTCAGGAGAGACACTGACATGGGAAGACATTTCAAAGATGAAGTACACCTGGAGAGTAGCAATGGAAACTCTTAGGATGATTCCTCCCGTCTTTGGTGGCTTCAGAAAGGCTGTGGCAGACATTGAATATGGTGGATACCTTATACCTAAAGGGTGGCAGATCTTCTGGGTTACAGCAATGACCCACATGGACAACAGCATTTTCTCAGAACCATCGAAGTTTGATCCAAGTAGATTTGAAAACCAAGCATCTGTCCCACCCTACTGCTTCATTCCATTTGGAGGAGGAGCAAGAATGTGTCCAGGATATGAGTTTGCCAGGGTTGAAATTCTCGTGGCAATTCATTACATTGTGACCCGGTTCAGTTGGAAGCTTTGTTCAGACAATTTCTTTAGCAGGGATCCAACGCCAGTACCCACTCAAGGGCTACTAGTTGAAATTTGGCCAAGGAAACTTTCTTAG 1425 0.4295 MSVLLVSFLLLIPILLLHRIRRKPSKRVPPGSLGIPIIGQSLGLLRAMRANVAEKWIEERTKKYGPISKLSLFGKPTVFIYGQAANKLIFQNSGNTIVNQQTQSIKMILGDRNLMELSGEDHSRVRNALVSFLKPESLKLYVGKMDEEVKRHLEMHWHGKQQIKVLPLMKTMTFNIICSLLFGIERGKQRDEFLACFKAMMGGMWSVPVNVPFTRYNRSLRASARIQNMMEEIVHKKKIELEQNGASAHKDLISCLLGMVGEDDKQVITEKEIIHNVRLVMVAGYDTSSVVITFIIRLLSNEPAIYAAVLQEQEEIAKSKPSGETLTWEDISKMKYTWRVAMETLRMIPPVFGGFRKAVADIEYGGYLIPKGWQIFWVTAMTHMDNSIFSEPSKFDPSRFENQASVPPYCFIPFGGGARMCPGYEFARVEILVAIHYIVTRFSWKLCSDNFFSRDPTPVPTQGLLVEIWPRKLS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3056g00012 474 CDD CYP90-like 60 470 - -
Gabi3056g00012 474 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS E-class P450 group I signature 272 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS E-class P450 group I signature 292 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 SUPERFAMILY Cytochrome P450 21 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 PRINTS P450 superfamily signature 283 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 FunFam Taxadiene 5-alpha hydroxylase 19 471 - -
Gabi3056g00012 474 PANTHER CYTOCHROME P450 26 26 458 - -
Gabi3056g00012 474 Gene3D Cytochrome P450 19 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 Pfam Cytochrome P450 29 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3056g00012 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3056g00012 Gabi-Chr3056 107623 109518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3056g00012 3 450 Cytochrome P450 AT5G45340 32.373 7.26e-78 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3056g00012 - - gmx:100790001 799.66