Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3055g00041 ATGGGTAGTGGGGAGAAGAGTCCGAGGAGCTTTTATTTGCATCGCCATCATCTCCAACATAACCATGGGAATGGGAAGAAGCAAGAGTTCAGAGATGTTCCAAAAGGGTGTTTGGCAATCAAGGTGGGTCAAGGAGAAGAACAACAGAGGTTTGTGGTGCCTGTCATATACTTCAATCACCCTCTTTTCATGCAGCTACTGAAGGAGGCTGAGGAAGAATATGGGTTTGATCAGAAAGGAACCATAACAATCCCTTGTCATGTTGAGGAATTCAGAAATGTTCGAGGCTTGATTGATAGAGACAAGTCCCTCCATCACCACCACCATGTTGGTTGTTTTGGGTTCTGA 348 0.4511 MGSGEKSPRSFYLHRHHLQHNHGNGKKQEFRDVPKGCLAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHVGCFGF 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3055g00041 115 Pfam Auxin responsive protein 27 94 IPR003676 GO:0009733
Gabi3055g00041 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 93 IPR003676 GO:0009733
Gabi3055g00041 115 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3055g00041 Gabi-Chr3055 435621 436469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3055g00041 32 111 Calmodulin-binding Proteins AT5G20810 48.148 2.15e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3055g00041 K14488 - cave:132187600 207.994