Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3055g00040 ATGGGTAGTGGGGAGAAGAGTCCGAGGAGCTTTTATTTGCATCGCCATCATCTCCAACATAACCATGGGAATGGGAAGAAGCAAGAGTTCAGAGATGTTCCAAAAGGGTGTTTGGCAATCAAGGTGGGTCAAGGAGAAGAACAACAGAGGTTTGTGGTGCCTGTCATATACTTCAATCACCCTCTTTTCATGCAGCTACTGAAGGAGGCTGAGGAAGAATATGGGTTTGATCAGAAAGGAACCATAACAATCCCTTGTCATGTTGAGGAATTCAGAAATGTTCGAGGCTTGATTGATAGAGACAAGTCCCTCCATCACCACCACCATGTTGGTTGTTTTGGGTTCTGA 348 0.4511 MGSGEKSPRSFYLHRHHLQHNHGNGKKQEFRDVPKGCLAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHVGCFGF 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3055g00040 115 Pfam Auxin responsive protein 27 94 IPR003676 GO:0009733
Gabi3055g00040 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 93 IPR003676 GO:0009733
Gabi3055g00040 115 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3055g00040 Gabi-Chr3055 435464 436469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3055g00040 32 111 Calmodulin-binding Proteins AT5G20810 48.148 2.15e-19 77.4