Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3055g00038 ATGAATACCCACATTGATAACCTCTGTGTGTTTGCCTTGGCCTCCAAATGCACACAAGAAAACATTGCATGGTCAATTTTTGTCATGGCTTCACTCTGGCTAACCATGACTTTCTTTCACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTACTACTCCACATGGAGAAAAACCACCACCAACAACAACAACAACCTTAACCTTCCCTCTTCTAATGTCTCAAACACCAACAACATTAAAAAGAACAACACAATGATTCCTGGTCCAAAAGGGTACCCTTTTATTGGAAGCATGAACCTCATGACCTCACTAGCACACCACCGTATAGCAGCGGCGGCGAAAGCATGCAGAGCCACAAGACTCATGGCCTTCAGCCTCGGCGAAACACGTGCTATTGTCACGTGCAACCCCGACGTTGCTAAAGAGATTCTTAATAGCTCTGTTTTCGCTGATCGTCCTATAAAGGAATCTGCTTACAGCCTCATGTTCAACCGCGCCATCGGTTTCGCCCCTTACGGCGTTTACTGGCGAACCCTGAGGAGAATCGCCGCCACGCACCTCTTCTGCCCCAAACAAATCAAGGCCTCGGAGATTCAACGCTCTGAGATCGCCACACAAATTATCCACGCCTTCACGAACCGCCACAACAACAACCACGGTTCTTTCGCGGTTCGACCGGTGCTGAAGGAAGCGTCGCTAAATAACATGATGTGGTCGGTGTTTGGACAACGGTATAAGGTAGACGAGGCAAACAGTGGAATGGAGGAGCTGAGTGGATTAGTGGAACAAGGGTATGACTTATTGGGTACCCTTAATTGGGGTGATCACTTACCCTGGCTTAAAGACTTTGATGCTCAAAAAATCCGGTTCGCTTGTTCCGAACTTGTCCCCAAGGTGAACCGGTTCGTTGGTTCAATCATCGCCGACCACCGAGCCGACATAACCCAAACCAACATGGATTTCGTTCATGTCTTGCTCTCTCTCCAAGGACCAGATAAGTTGTCTGAATCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGAGGGACGGATACTGTGGCGGTTTTGATTGAGTGGATACTAGCAAGGATTGTGCTTCATCCTGAGGTTCAAGAGAAGGTGCAAGCGGAGCTTGACCGTGTAATTGGTGGTGGGTCACGTGACATCAGGGAGGAGGATGTGACGGCGATGGTGTACCTTCCGGCGGTGGTTAAGGAGGTCCTGAGACTGCATCCTCCGGGCCCACTTCTCTCGTGGGCCCGTTTGGCAATAACTAATACAACCATTGATGGGTATCATGTGCCTGCGGGGACCACTGCCATGGTTAATATGTGGGCCATAACTCGGGACCCAGAGGTGTGGAGGGACCCACTTGAATTTATGCCAGAGAGGTTTTTGGGCAAAGGGGTCGAGTTTTCTGTTTTCGGGTCGGATCTGAGGCTGGCTCCGTTCGGGTCGGGTAGAAGGACTTGTCCCGGGAAGACTTTGGGTTTGAGTACTGTGACCTTCTGGGTTGCTAGGCTTTTACACGAGTTTGAATGGCTACCGTCTGATGATAATGAGGTTGATCTAACGGAGGTGCTGAGGCTCTCTAGTGAAATGGCTAACCCTCTCACTGTTAAAGTGCGCACTAGGCGTGGGTTAAACTTATCTAAGTTAAGTTGA 1677 0.4961 MNTHIDNLCVFALASKCTQENIAWSIFVMASLWLTMTFFHWSHPGGPAWGKYYYYSTWRKTTTNNNNNLNLPSSNVSNTNNIKKNNTMIPGPKGYPFIGSMNLMTSLAHHRIAAAAKACRATRLMAFSLGETRAIVTCNPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEIQRSEIATQIIHAFTNRHNNNHGSFAVRPVLKEASLNNMMWSVFGQRYKVDEANSGMEELSGLVEQGYDLLGTLNWGDHLPWLKDFDAQKIRFACSELVPKVNRFVGSIIADHRADITQTNMDFVHVLLSLQGPDKLSESDMIAVLWEMIFRGTDTVAVLIEWILARIVLHPEVQEKVQAELDRVIGGGSRDIREEDVTAMVYLPAVVKEVLRLHPPGPLLSWARLAITNTTIDGYHVPAGTTAMVNMWAITRDPEVWRDPLEFMPERFLGKGVEFSVFGSDLRLAPFGSGRRTCPGKTLGLSTVTFWVARLLHEFEWLPSDDNEVDLTEVLRLSSEMANPLTVKVRTRRGLNLSKLS 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3055g00038 558 PRINTS E-class P450 group I signature 341 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS E-class P450 group I signature 485 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS E-class P450 group I signature 495 518 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS E-class P450 group I signature 447 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS E-class P450 group I signature 234 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS E-class P450 group I signature 405 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 Gene3D Cytochrome P450 75 553 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 FunFam Cytochrome P450 78A5 81 549 - -
Gabi3055g00038 558 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 488 497 IPR017972 GO:0005506|GO:0016705
Gabi3055g00038 558 PRINTS P450 superfamily signature 486 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS P450 superfamily signature 495 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 PANTHER CYTOCHROME P450 78A7-RELATED 2 550 - -
Gabi3055g00038 558 CDD CYP78 122 542 - -
Gabi3055g00038 558 SUPERFAMILY Cytochrome P450 89 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00038 558 Pfam Cytochrome P450 90 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3055g00038 Gabi-Chr3055 318758 320956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3055g00038 1 550 Cytochrome P450 AT2G46660 62.410 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3055g00038 K20619 - gmx:100798388 869.381