Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3055g00037 ATGAATACCCACATTGATAACCTCTGTGTGTTTGCCTTGGCCTCCAAATGCACACAAGAAAACATTGCATGGTCAATTTTTGTCATGGCTTCACTCTGGCTAACCATGACTTTCTTTCACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTACTACTCCACATGGAGAAAAACCACCACCAACAAAATGATTCCTGGTCCAAAAGGGTACCCTTTTATTGGAAGCATGAACCTCATGACCTCACTAGCACACCACCGTATAGCAGCGGCGGCGAAAGCATGCAGAGCCACAAGACTCATGGCCTTCAGCCTCGGCGAAACACGTGCTATTGTCACGTGCAACCCCGACGTTGCTAAAGAGATTCTTAATAGCTCTGTTTTCGCTGATCGTCCTATAAAGGAATCTGCTTACAGCCTCATGTTCAACCGCGCCATCGGTTTCGCCCCTTACGGCGTTTACTGGCGAACCCTGAGGAGAATCGCCGCCACGCACCTCTTCTGCCCCAAACAAATCAAGGCCTCGGAGATTCAACGCTCTGAGATCGCCACACAAATTATCCACGCCTTCACGAACCGCCACAACAACAACCACGGTTCTTTCGCGGTTCGACCGGTGCTGAAGGAAGCGTCGCTAAATAACATGATGTGGTCGGTGTTTGGACAACGGTATAAGGTAGACGAGGCAAACAGTGGAATGGAGGAGCTGAGTGGATTAGTGGAACAAGGGTATGACTTATTGGGTACCCTTAATTGGGGTGATCACTTACCCTGGCTTAAAGACTTTGATGCTCAAAAAATCCGGTTCGCTTGTTCCGAACTTGTCCCCAAGGTGAACCGGTTCGTTGGTTCAATCATCGCCGACCACCGAGCCGACATAACCCAAACCAACATGGATTTCGTTCATGTCTTGCTCTCTCTCCAAGGACCAGATAAGTTGTCTGAATCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGAGGGACGGATACTGTGGCGGTTTTGATTGAGTGGATACTAGCAAGGATTGTGCTTCATCCTGAGGTTCAAGAGAAGGTGCAAGCGGAGCTTGACCGTGTAATTGGTGGTGGGTCACGTGACATCAGGGAGGAGGATGTGACGGCGATGGTGTACCTTCCGGCGGTGGTTAAGGAGGTCCTGAGACTGCATCCTCCGGGCCCACTTCTCTCGTGGGCCCGTTTGGCAATAACTAATACAACCATTGATGGGTATCATGTGCCTGCGGGGACCACTGCCATGGTTAATATGTGGGCCATAACTCGGGACCCAGAGGTGTGGAGGGACCCACTTGAATTTATGCCAGAGAGGTTTTTGGGCAAAGGGGTCGAGTTTTCTGTTTTCGGGTCGGATCTGAGGCTGGCTCCGTTCGGGTCGGGTAGAAGGACTTGTCCCGGGAAGACTTTGGGTTTGAGTACTGTGACCTTCTGGGTTGCTAGGCTTTTACACGAGTTTGAATGGCTACCGTCTGATGATAATGAGGTTGATCTAACGGAGGTGCTGAGGCTCTCTAGTGAAATGGCTAACCCTCTCACTGTTAAAGTGCGCACTAGGCGTGGGTTAAACTTATCTAAGTTAAGTTGA 1611 0.5016 MNTHIDNLCVFALASKCTQENIAWSIFVMASLWLTMTFFHWSHPGGPAWGKYYYYSTWRKTTTNKMIPGPKGYPFIGSMNLMTSLAHHRIAAAAKACRATRLMAFSLGETRAIVTCNPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEIQRSEIATQIIHAFTNRHNNNHGSFAVRPVLKEASLNNMMWSVFGQRYKVDEANSGMEELSGLVEQGYDLLGTLNWGDHLPWLKDFDAQKIRFACSELVPKVNRFVGSIIADHRADITQTNMDFVHVLLSLQGPDKLSESDMIAVLWEMIFRGTDTVAVLIEWILARIVLHPEVQEKVQAELDRVIGGGSRDIREEDVTAMVYLPAVVKEVLRLHPPGPLLSWARLAITNTTIDGYHVPAGTTAMVNMWAITRDPEVWRDPLEFMPERFLGKGVEFSVFGSDLRLAPFGSGRRTCPGKTLGLSTVTFWVARLLHEFEWLPSDDNEVDLTEVLRLSSEMANPLTVKVRTRRGLNLSKLS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3055g00037 536 Pfam Cytochrome P450 68 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Gabi3055g00037 536 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 SUPERFAMILY Cytochrome P450 67 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 CDD CYP78 100 520 - -
Gabi3055g00037 536 Gene3D Cytochrome P450 54 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 FunFam Cytochrome P450 78A5 59 527 - -
Gabi3055g00037 536 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00037 536 PANTHER CYTOCHROME P450 78A7-RELATED 2 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3055g00037 Gabi-Chr3055 318758 320956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3055g00037 1 528 Cytochrome P450 AT2G46660 64.860 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3055g00037 K20619 - gmx:100798388 871.692