Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3055g00036 ATGAATACCCACATTGATAACCTCTGTGTGTTTGCCTTGGCCTCCAAATGCACACAAGAAAACATTGCATGGTCAATTTTTGTCATGGCTTCACTCTGGCTAACCATGACTTTCTTTCACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTACTACTCCACAATGATTCCTGGTCCAAAAGGGTACCCTTTTATTGGAAGCATGAACCTCATGACCTCACTAGCACACCACCGTATAGCAGCGGCGGCGAAAGCATGCAGAGCCACAAGACTCATGGCCTTCAGCCTCGGCGAAACACGTGCTATTGTCACGTGCAACCCCGACGTTGCTAAAGAGATTCTTAATAGCTCTGTTTTCGCTGATCGTCCTATAAAGGAATCTGCTTACAGCCTCATGTTCAACCGCGCCATCGGTTTCGCCCCTTACGGCGTTTACTGGCGAACCCTGAGGAGAATCGCCGCCACGCACCTCTTCTGCCCCAAACAAATCAAGGCCTCGGAGATTCAACGCTCTGAGATCGCCACACAAATTATCCACGCCTTCACGAACCGCCACAACAACAACCACGGTTCTTTCGCGGTTCGACCGGTGCTGAAGGAAGCGTCGCTAAATAACATGATGTGGTCGGTGTTTGGACAACGGTATAAGGTAGACGAGGCAAACAGTGGAATGGAGGAGCTGAGTGGATTAGTGGAACAAGGGTATGACTTATTGGGTACCCTTAATTGGGGTGATCACTTACCCTGGCTTAAAGACTTTGATGCTCAAAAAATCCGGTTCGCTTGTTCCGAACTTGTCCCCAAGGTGAACCGGTTCGTTGGTTCAATCATCGCCGACCACCGAGCCGACATAACCCAAACCAACATGGATTTCGTTCATGTCTTGCTCTCTCTCCAAGGACCAGATAAGTTGTCTGAATCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGAGGGACGGATACTGTGGCGGTTTTGATTGAGTGGATACTAGCAAGGATTGTGCTTCATCCTGAGGTTCAAGAGAAGGTGCAAGCGGAGCTTGACCGTGTAATTGGTGGTGGGTCACGTGACATCAGGGAGGAGGATGTGACGGCGATGGTGTACCTTCCGGCGGTGGTTAAGGAGGTCCTGAGACTGCATCCTCCGGGCCCACTTCTCTCGTGGGCCCGTTTGGCAATAACTAATACAACCATTGATGGGTATCATGTGCCTGCGGGGACCACTGCCATGGTTAATATGTGGGCCATAACTCGGGACCCAGAGGTGTGGAGGGACCCACTTGAATTTATGCCAGAGAGGTTTTTGGGCAAAGGGGTCGAGTTTTCTGTTTTCGGGTCGGATCTGAGGCTGGCTCCGTTCGGGTCGGGTAGAAGGACTTGTCCCGGGAAGACTTTGGGTTTGAGTACTGTGACCTTCTGGGTTGCTAGGCTTTTACACGAGTTTGAATGGCTACCGTCTGATGATAATGAGGTTGATCTAACGGAGGTGCTGAGGCTCTCTAGTGAAATGGCTAACCCTCTCACTGTTAAAGTGCGCACTAGGCGTGGGTTAAACTTATCTAAGTTAAGTTGA 1587 0.5028 MNTHIDNLCVFALASKCTQENIAWSIFVMASLWLTMTFFHWSHPGGPAWGKYYYYSTMIPGPKGYPFIGSMNLMTSLAHHRIAAAAKACRATRLMAFSLGETRAIVTCNPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEIQRSEIATQIIHAFTNRHNNNHGSFAVRPVLKEASLNNMMWSVFGQRYKVDEANSGMEELSGLVEQGYDLLGTLNWGDHLPWLKDFDAQKIRFACSELVPKVNRFVGSIIADHRADITQTNMDFVHVLLSLQGPDKLSESDMIAVLWEMIFRGTDTVAVLIEWILARIVLHPEVQEKVQAELDRVIGGGSRDIREEDVTAMVYLPAVVKEVLRLHPPGPLLSWARLAITNTTIDGYHVPAGTTAMVNMWAITRDPEVWRDPLEFMPERFLGKGVEFSVFGSDLRLAPFGSGRRTCPGKTLGLSTVTFWVARLLHEFEWLPSDDNEVDLTEVLRLSSEMANPLTVKVRTRRGLNLSKLS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3055g00036 528 Pfam Cytochrome P450 60 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PANTHER CYTOCHROME P450 78A7-RELATED 2 520 - -
Gabi3055g00036 528 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 SUPERFAMILY Cytochrome P450 59 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 Gene3D Cytochrome P450 55 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 CDD CYP78 92 512 - -
Gabi3055g00036 528 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00036 528 FunFam Cytochrome P450 78A5 52 519 - -
Gabi3055g00036 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3055g00036 Gabi-Chr3055 318758 320956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3055g00036 1 520 Cytochrome P450 AT2G46660 64.860 0.0 691