Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3055g00035 ATGAATACCCACATTGATAACCTCTGTGTGTTTGCCTTGGCCTCCAAATGCACACAAGAAAACATTGCATGGTCAATTTTTGTCATGGCTTCACTCTGGCTAACCATGACTTTCTTTCACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTACTACTCTAAAAAGAACAACACAATGATTCCTGGTCCAAAAGGGTACCCTTTTATTGGAAGCATGAACCTCATGACCTCACTAGCACACCACCGTATAGCAGCGGCGGCGAAAGCATGCAGAGCCACAAGACTCATGGCCTTCAGCCTCGGCGAAACACGTGCTATTGTCACGTGCAACCCCGACGTTGCTAAAGAGATTCTTAATAGCTCTGTTTTCGCTGATCGTCCTATAAAGGAATCTGCTTACAGCCTCATGTTCAACCGCGCCATCGGTTTCGCCCCTTACGGCGTTTACTGGCGAACCCTGAGGAGAATCGCCGCCACGCACCTCTTCTGCCCCAAACAAATCAAGGCCTCGGAGATTCAACGCTCTGAGATCGCCACACAAATTATCCACGCCTTCACGAACCGCCACAACAACAACCACGGTTCTTTCGCGGTTCGACCGGTGCTGAAGGAAGCGTCGCTAAATAACATGATGTGGTCGGTGTTTGGACAACGGTATAAGGTAGACGAGGCAAACAGTGGAATGGAGGAGCTGAGTGGATTAGTGGAACAAGGGTATGACTTATTGGGTACCCTTAATTGGGGTGATCACTTACCCTGGCTTAAAGACTTTGATGCTCAAAAAATCCGGTTCGCTTGTTCCGAACTTGTCCCCAAGGTGAACCGGTTCGTTGGTTCAATCATCGCCGACCACCGAGCCGACATAACCCAAACCAACATGGATTTCGTTCATGTCTTGCTCTCTCTCCAAGGACCAGATAAGTTGTCTGAATCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGAGGGACGGATACTGTGGCGGTTTTGATTGAGTGGATACTAGCAAGGATTGTGCTTCATCCTGAGGTTCAAGAGAAGGTGCAAGCGGAGCTTGACCGTGTAATTGGTGGTGGGTCACGTGACATCAGGGAGGAGGATGTGACGGCGATGGTGTACCTTCCGGCGGTGGTTAAGGAGGTCCTGAGACTGCATCCTCCGGGCCCACTTCTCTCGTGGGCCCGTTTGGCAATAACTAATACAACCATTGATGGGTATCATGTGCCTGCGGGGACCACTGCCATGGTTAATATGTGGGCCATAACTCGGGACCCAGAGGTGTGGAGGGACCCACTTGAATTTATGCCAGAGAGGTTTTTGGGCAAAGGGGTCGAGTTTTCTGTTTTCGGGTCGGATCTGAGGCTGGCTCCGTTCGGGTCGGGTAGAAGGACTTGTCCCGGGAAGACTTTGGGTTTGAGTACTGTGACCTTCTGGGTTGCTAGGCTTTTACACGAGTTTGAATGGCTACCGTCTGATGATAATGAGGTTGATCTAACGGAGGTGCTGAGGCTCTCTAGTGAAATGGCTAACCCTCTCACTGTTAAAGTGCGCACTAGGCGTGGGTTAAACTTATCTAAGTTAAGTTGA 1599 0.5003 MNTHIDNLCVFALASKCTQENIAWSIFVMASLWLTMTFFHWSHPGGPAWGKYYYYSKKNNTMIPGPKGYPFIGSMNLMTSLAHHRIAAAAKACRATRLMAFSLGETRAIVTCNPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEIQRSEIATQIIHAFTNRHNNNHGSFAVRPVLKEASLNNMMWSVFGQRYKVDEANSGMEELSGLVEQGYDLLGTLNWGDHLPWLKDFDAQKIRFACSELVPKVNRFVGSIIADHRADITQTNMDFVHVLLSLQGPDKLSESDMIAVLWEMIFRGTDTVAVLIEWILARIVLHPEVQEKVQAELDRVIGGGSRDIREEDVTAMVYLPAVVKEVLRLHPPGPLLSWARLAITNTTIDGYHVPAGTTAMVNMWAITRDPEVWRDPLEFMPERFLGKGVEFSVFGSDLRLAPFGSGRRTCPGKTLGLSTVTFWVARLLHEFEWLPSDDNEVDLTEVLRLSSEMANPLTVKVRTRRGLNLSKLS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3055g00035 532 PANTHER CYTOCHROME P450 78A7-RELATED 2 524 - -
Gabi3055g00035 532 FunFam Cytochrome P450 78A5 55 523 - -
Gabi3055g00035 532 SUPERFAMILY Cytochrome P450 63 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 Pfam Cytochrome P450 64 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Gabi3055g00035 532 CDD CYP78 96 516 - -
Gabi3055g00035 532 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00035 532 Gene3D Cytochrome P450 54 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3055g00035 Gabi-Chr3055 318758 320956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3055g00035 39 527 Cytochrome P450 AT3G61880 70.385 0.0 696