Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3055g00034 ATGAATACCCACATTGATAACCTCTGTGTGTTTGCCTTGGCCTCCAAATGCACACAAGAAAACATTGCATGGTCAATTTTTGTCATGGCTTCACTCTGGCTAACCATGACTTTCTTTCACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAGTACTACTACTATAAAAAGAACAACACAATGATTCCTGGTCCAAAAGGGTACCCTTTTATTGGAAGCATGAACCTCATGACCTCACTAGCACACCACCGTATAGCAGCGGCGGCGAAAGCATGCAGAGCCACAAGACTCATGGCCTTCAGCCTCGGCGAAACACGTGCTATTGTCACGTGCAACCCCGACGTTGCTAAAGAGATTCTTAATAGCTCTGTTTTCGCTGATCGTCCTATAAAGGAATCTGCTTACAGCCTCATGTTCAACCGCGCCATCGGTTTCGCCCCTTACGGCGTTTACTGGCGAACCCTGAGGAGAATCGCCGCCACGCACCTCTTCTGCCCCAAACAAATCAAGGCCTCGGAGATTCAACGCTCTGAGATCGCCACACAAATTATCCACGCCTTCACGAACCGCCACAACAACAACCACGGTTCTTTCGCGGTTCGACCGGTGCTGAAGGAAGCGTCGCTAAATAACATGATGTGGTCGGTGTTTGGACAACGGTATAAGGTAGACGAGGCAAACAGTGGAATGGAGGAGCTGAGTGGATTAGTGGAACAAGGGTATGACTTATTGGGTACCCTTAATTGGGGTGATCACTTACCCTGGCTTAAAGACTTTGATGCTCAAAAAATCCGGTTCGCTTGTTCCGAACTTGTCCCCAAGGTGAACCGGTTCGTTGGTTCAATCATCGCCGACCACCGAGCCGACATAACCCAAACCAACATGGATTTCGTTCATGTCTTGCTCTCTCTCCAAGGACCAGATAAGTTGTCTGAATCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGAGGGACGGATACTGTGGCGGTTTTGATTGAGTGGATACTAGCAAGGATTGTGCTTCATCCTGAGGTTCAAGAGAAGGTGCAAGCGGAGCTTGACCGTGTAATTGGTGGTGGGTCACGTGACATCAGGGAGGAGGATGTGACGGCGATGGTGTACCTTCCGGCGGTGGTTAAGGAGGTCCTGAGACTGCATCCTCCGGGCCCACTTCTCTCGTGGGCCCGTTTGGCAATAACTAATACAACCATTGATGGGTATCATGTGCCTGCGGGGACCACTGCCATGGTTAATATGTGGGCCATAACTCGGGACCCAGAGGTGTGGAGGGACCCACTTGAATTTATGCCAGAGAGGTTTTTGGGCAAAGGGGTCGAGTTTTCTGTTTTCGGGTCGGATCTGAGGCTGGCTCCGTTCGGGTCGGGTAGAAGGACTTGTCCCGGGAAGACTTTGGGTTTGAGTACTGTGACCTTCTGGGTTGCTAGGCTTTTACACGAGTTTGAATGGCTACCGTCTGATGATAATGAGGTTGATCTAACGGAGGTGCTGAGGCTCTCTAGTGAAATGGCTAACCCTCTCACTGTTAAAGTGCGCACTAGGCGTGGGTTAAACTTATCTAAGTTAAGTTGA 1596 0.5 MNTHIDNLCVFALASKCTQENIAWSIFVMASLWLTMTFFHWSHPGGPAWGKYYYYKKNNTMIPGPKGYPFIGSMNLMTSLAHHRIAAAAKACRATRLMAFSLGETRAIVTCNPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASEIQRSEIATQIIHAFTNRHNNNHGSFAVRPVLKEASLNNMMWSVFGQRYKVDEANSGMEELSGLVEQGYDLLGTLNWGDHLPWLKDFDAQKIRFACSELVPKVNRFVGSIIADHRADITQTNMDFVHVLLSLQGPDKLSESDMIAVLWEMIFRGTDTVAVLIEWILARIVLHPEVQEKVQAELDRVIGGGSRDIREEDVTAMVYLPAVVKEVLRLHPPGPLLSWARLAITNTTIDGYHVPAGTTAMVNMWAITRDPEVWRDPLEFMPERFLGKGVEFSVFGSDLRLAPFGSGRRTCPGKTLGLSTVTFWVARLLHEFEWLPSDDNEVDLTEVLRLSSEMANPLTVKVRTRRGLNLSKLS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3055g00034 531 PANTHER CYTOCHROME P450 78A7-RELATED 2 523 - -
Gabi3055g00034 531 CDD CYP78 95 515 - -
Gabi3055g00034 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Gabi3055g00034 531 Gene3D Cytochrome P450 54 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 FunFam Cytochrome P450 78A5 54 522 - -
Gabi3055g00034 531 Pfam Cytochrome P450 63 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 SUPERFAMILY Cytochrome P450 62 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3055g00034 531 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3055g00034 Gabi-Chr3055 318758 320956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3055g00034 1 523 Cytochrome P450 AT2G46660 65.112 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3055g00034 K20619 - gmx:100798388 861.292