Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3054g00026 ATGGGTGGTTCTGGAAGATGGTTTAAGTCACTTATTTCTCTCAAAAAGCTCTCCACGAACGATCAAGAGAAGGGTAGTGATAAGAGTAAGAAAAAATGGAAGTTATGGAGGAGTTCTTCAGAAGGCTTTGGGTGTGGATCCTCCATGAAGAAAGCGCATGGCGGTGTTGCTTCTGATAAGCCTTGGTGTTCTTCGCTTGTGGTGGATGAAGAAGCATTTGCTGCTGCAGTGGCCACTGTTTTAAGAACTCCACACAAAGACTTCATGATTATCAAGCAGGAATGGGCTTCCATTCGTATTCAGGCTGTGTTTCGAGGCTTCTTGGCAAGAAGAGCTTTGAGGGCCCTGAGGGCAGTGGTGAGGCTGCAAGCTATATTTCGTGGTAGGCAAGTGAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTCAAGGCAAGGAATGTGGAGACACAAGGGAAAGCTGTGCAGAAACTATTAGATGAAGCTGATCCTGTTAAGCAGGCTGAGCAAGGGTGGTGTGACATTCCAGGAACTGTGGAACAAGTTAAAACAAAACTACAAATGAGGCAAGAAGGAGCAATTAAGAGGGATAGAACAATGGCATACTCTCTCTCTACCCAGCAATCAACAGTGAGTGCTAGTCCAAATTCAACAGCTTCTAAGCCAGTGACTCCTCTCAAGCACCGCAGCATAGATAGTAAGAGCTTGTTAGAACGCTGGATTGCAGCCAAGCCATGGGAGAGTAGGTTGATGGAAGAGGTACATTTTGATTCACCTGACATGACTCCAATGTCCAGGAAAAGTGATGATCTTCTCCCCTTTAATCCATATCATCAAAATGGCTTAGTCAAAGCAAGAAGGAATGGTGTGACAACAAGGATTTCAACTAAATCTGTTAAAACTAGTCAATCAACTCCATCATCTTCTGCCATAAGCTCTGAATGCATGTATGATGATAGCCCTGTATCGACTTCATGTACATCTGGATCACAATCTCTACCATCTATCAACACTGTCATGGTGGGAGCCACAGAGGAAAGGAATATTGATAAACCAAACTACATGAATCTGACAACATCAACAAAAGCTAAACTGAAAGCTTGCAGGTGTTCTTCTCAGAATTCAAAGAGACTCTTTATGGATGATTGTCTGTCTCATAGCCCGAAAACAGACTTTCTAAATAGAGATACTAGAAGCTGTTCTGGTTCCTATCCTTCGGTTAATTCATGGAAGGATCTATATGCAACACCTCTAAGGGCAAGTTATCACAAACGATATACTCTTGGAGATAAGTAG 1323 0.4339 MGGSGRWFKSLISLKKLSTNDQEKGSDKSKKKWKLWRSSSEGFGCGSSMKKAHGGVASDKPWCSSLVVDEEAFAAAVATVLRTPHKDFMIIKQEWASIRIQAVFRGFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARNVETQGKAVQKLLDEADPVKQAEQGWCDIPGTVEQVKTKLQMRQEGAIKRDRTMAYSLSTQQSTVSASPNSTASKPVTPLKHRSIDSKSLLERWIAAKPWESRLMEEVHFDSPDMTPMSRKSDDLLPFNPYHQNGLVKARRNGVTTRISTKSVKTSQSTPSSSAISSECMYDDSPVSTSCTSGSQSLPSINTVMVGATEERNIDKPNYMNLTTSTKAKLKACRCSSQNSKRLFMDDCLSHSPKTDFLNRDTRSCSGSYPSVNSWKDLYATPLRASYHKRYTLGDK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3054g00026 440 Gene3D - 91 145 - -
Gabi3054g00026 440 MobiDBLite consensus disorder prediction 215 233 - -
Gabi3054g00026 440 MobiDBLite consensus disorder prediction 302 325 - -
Gabi3054g00026 440 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Gabi3054g00026 440 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Gabi3054g00026 440 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Gabi3054g00026 440 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Gabi3054g00026 440 PANTHER IQ-DOMAIN 5-RELATED 1 403 - -
Gabi3054g00026 440 SMART iq_5 92 114 IPR000048 GO:0005515
Gabi3054g00026 440 SMART iq_5 115 136 IPR000048 GO:0005515
Gabi3054g00026 440 MobiDBLite consensus disorder prediction 215 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3054g00026 Gabi-Chr3054 202068 204340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3054g00026 1 423 IQD Protein Family AT1G72670 44.851 3.84e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3054g00026 - - ahf:112710157 556.599