Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3035g00002 ATGTCATGTACTGCTGGAAAGGTCATACGCTGCAAAGCTGCGGTGGCATGGGAAGCAGGAAAGCCGCTGGTGATGGAGGAAGTGGAGGTAGCTCCACCACAGGCAAATGAGGTTCGTATCAAGATATTGTTCACCTCACTCTGCCACACTGATGTCTACTTCTGGGAAGCTAAGGGACAAACACCCTTATTTCCACGCATATTTGGTCATGAAGCAGGCGGAATTGTGGAAAGTGTTGGTGAGGGTGTGATGGATGTGAAGGCTGGGGATCATGTGCTTCCAGTGTTCACAGGGGAATGCAAAGAGTGTGAGCATTGCAAATCAGAGGAAAGTAACATGTGTGACCTCTTAAGGATTAATACTGACCGTGGAGTGATGCTCAATGATGGCCACTCAAGGTTTTCAATTAATGGAAAACCAATATACCATTTTGTTGGAACCTCCACTTTCAGTGAATACACCGTTGTTCATGTTGGCTGTGTTGCCAAGATCAACCCCGCTGCCCCACTTGACAAAGTTTGTATTCTCAGCTGTGGAATCTCAACAGGTCTTGGTGCTACCTTGAATGTTGCAAAACCAAGCAAAGGTTCATCAGTTGCTATATTTGGATTGGGAGCTGTGGGACTCGCTGCTGCTGAGGGAGCTAGACTTGCTGGTGCTTCCAGGATTATTGGGGTTGACTTGAATTCTAAGAGATTTATTGAATCTAAGAAGTTTGGAGTTACTGAGTTTGTGAATCCAAAGGATTATGACAAGCCCGTTCAAGAGGTGATTGTTGCGTTGACTGGCGGGGGAGTTGACCGAAGTGTTGAGTGTACTGGAAGTATCAGTGCTATGATCTCTGCATTCGAATGCGTGCATGATGGATGGGGTGTTGCTGTACTTGTTGGTGTGCCAAATAAAGATGATGCTTTCAAAACCCATCCAATTAATGTATTGAACGAAAAGACTCTAAAGGGTACTTTCTTTGGTAACTATAAACCACGGTCTGACCTCCCATCAGTGGTGGAGATGTACATGAACAAGGAACTTGAACTGGAGAAATTCATAACCCATGAAGTGCCTTTCTCAGAAATCAACAAAGCCTTCGAATACATGCTTAAAGGGGAGAGCCTGCGTTGTATAATCCGCATGAGTGCATAG 1143 0.4523 MSCTAGKVIRCKAAVAWEAGKPLVMEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVMDVKAGDHVLPVFTGECKECEHCKSEESNMCDLLRINTDRGVMLNDGHSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCILSCGISTGLGATLNVAKPSKGSSVAIFGLGAVGLAAAEGARLAGASRIIGVDLNSKRFIESKKFGVTEFVNPKDYDKPVQEVIVALTGGGVDRSVECTGSISAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPINVLNEKTLKGTFFGNYKPRSDLPSVVEMYMNKELELEKFITHEVPFSEINKAFEYMLKGESLRCIIRMSA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3035g00002 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 342 IPR036291 -
Gabi3035g00002 380 Pfam Zinc-binding dehydrogenase 206 336 IPR013149 -
Gabi3035g00002 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Gabi3035g00002 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Gabi3035g00002 380 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Gabi3035g00002 380 Gene3D - 19 370 - -
Gabi3035g00002 380 Gene3D - 183 321 - -
Gabi3035g00002 380 CDD alcohol_DH_plants 9 377 - -
Gabi3035g00002 380 PANTHER ALCOHOL DEHYDROGENASE 6 376 - -
Gabi3035g00002 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
Gabi3035g00002 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Gabi3035g00002 380 SUPERFAMILY GroES-like 328 377 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3035g00002 Gabi-Chr3035 25465 34441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3035g00002 15 370 Monolignol Biosynthesis Gene Families AT1G72680 25.549 5.42e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3035g00002 K18857 - gmx:100783318 706.057