Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00052 ATGGGTGCCATAGAACTCCGCTCACTAAAGCGCTGCAATGAATTTCGAGCATCCGGAGCATGCTGTGTAGAAGGTGCTGCGGAACTATCTGGTAAGAATCTAATAACCCTTGACGAGGATGAGGCTCCTCCAAAGAAAACGGTTGAATTTGAAGAAGCTATGAGTTTTTTGAACAAGATAAAGAAACGATTCCAAAGTGATGAGCATGTTTACAAATCGTTCTTGGACATTATGAATATGTACCGCAAAGAGCATAAGGTCATGGGTGAAGTTTATAGTGAGGTTGCTACCCTGTTTAAGGATAATCGAGATTTGCTTGAGAAGTTCACTAGATTCTTACCAGATAGTTCCGCAACACCTTCTACACAGCATGCTCCGGATTCTCGAAATTCATTGCAGAACTTTAGTGAGCGGAGTTCTATGGCACCCATGATGCGGTAA 441 0.4263 MGAIELRSLKRCNEFRASGACCVEGAAELSGKNLITLDEDEAPPKKTVEFEEAMSFLNKIKKRFQSDEHVYKSFLDIMNMYRKEHKVMGEVYSEVATLFKDNRDLLEKFTRFLPDSSATPSTQHAPDSRNSLQNFSERSSMAPMMR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00052 146 MobiDBLite consensus disorder prediction 116 146 - -
Gabi3033g00052 146 Gene3D Paired amphipathic helix 45 117 IPR036600 GO:0006355
Gabi3033g00052 146 ProSiteProfiles PAH domain profile. 46 116 IPR003822 GO:0006355
Gabi3033g00052 146 PANTHER SIN3B-RELATED 35 118 IPR039774 GO:0003714
Gabi3033g00052 146 FunFam Paired amphipathic helix SIN3-like protein 45 116 - -
Gabi3033g00052 146 Pfam Paired amphipathic helix repeat 69 113 IPR003822 GO:0006355
Gabi3033g00052 146 SUPERFAMILY PAH2 domain 43 115 IPR036600 GO:0006355
Gabi3033g00052 146 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00052 Gabi-Chr3033 425762 426320 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi3033g00052 PAH 2.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00052 K11644 - gmx:100807181 196.438