Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00048 ATGAAGAGGGATCACCAATCTAGCTACGGAGGAGGGAGTGTGAAAGGTGAATGCTCGTCAATGTCGAGTGGCAAGGCCAAGATGTGGGATGAAGAACATGCCGCCGCCGCCGCCACAGTCGGCGGCGGCGTGGACGAGTTGCTGGCGGCTTTGGGTTACAACGTACGTTCTTCAGACATGGCTGACGTGGCTCAGAAGCTGGAACAGCTTGAGATGGTTATGGGAACTGCTAAGGAAGATGGAATTTGCCACCTTGCTTCTGACACCGTTCACTATGACCCAACCGATCTCTATTCATGGGTTCAAAGCATGCTCACAGAACTGAACCCTTCTTCCACCACCACTACCACCACCACAATCCTCGATCCATCGTGGAACCCTCAAATCAACGACCCAATAGACCCTTCTTCAATCCTCGCCAATCACACACAACAACAAATCCACAACCCAACAAGAATATTCAACGACGATTCAGAATACGACCTCAGAGCAATCCCTGGCATAGCAGCATACCCACCACAACAACAACAGCAAAACCCACACAACGAAACCGAAATCGAAACCAGCAACAAGCGATTGAAGCCATGGCCAATTGAATCAGATTCACCACCACTCCCGCCACCGCCACCACCAACAGTGTCAGAACCAACAAGACCCGTTGTTCTCGTTGACTCGCAGGAAACAGGGGTTCGTCTCGTTCACACTCTCATGGCTTGCGCCGAAGCTGTTCAGCAAGAGAATCTCAAGCTCGCTGACACGCTTGTCAAGCACATAGGTTTGCTCGCAGCGTCGCAAGCCGGAGCTATGAGGAAGGTAGCTTCTTACTTCGCACAAGCCCTTGCTCGGAGAATTTACCGAATCTACCCTGAGGAAACCCTAGATTCCTCTTTCTCCGACATGCTCCACATGCACTTTTACGAATCTTCCCCTTACCTGAAATTCGCACACTTCACAGCGAATCAGGCGATTCTCGAAGCCTTCGCCGGCGCCGGCAGTGTCCACGTCATCGATTTCGACCTCAAACAAGGGATGCAATGGCCGGCGCTGATGCAGGCCCTAGCATTGCGCGTCGGCGGTCCTCCGACTTTCCGGTTAACCGGAATCGGACCACCGCAGCCGGACAACACCGACGCGCTTCAACAGGTTGGGTTGAAGTTGGCTCAGCTGGCTCATACCATTGGGGTTCAGTTCGAATTTCGCGGATTCGTTTGCAACAGTTTGGCGGATCTTGACCCGAACATGCTCGAGATCCGACCCGGTGAGGCTGTTGCTGTTAACTCCGTTTTCGAGCTCCACCGCATGCTGGCCCGACCCGGATCCATTGAGAAGGTACTGGGTACTGTTAAGAAGATTAAGCCCAAGATTGTGACTATTGTTGAACAGGAAGCGAACCACAATGGACCGGTTTTTGTGGACCGGTTCACGGAGGCTCTGCATTATTATTCAAGCTTGTTTGACTCGCTGGAGGGTTCGTCTTCGTCGTCGTCGACCGGGTTGGCACCGCCGAGTCAGGACCTGCTGATGTCGGAGCTCTACCTTGGGAGGCAGATTTGCAACGTGGTGGCTTGCGAAGGGGTGGACCGGGTCGAGCGACACGAGACACTGAACCAGTGGAGGGGGAGGATGGGCTCGGCCGGTTTCGACCCGGTTCATCTCGGTTCGAACGCGTTCAAGCAAGCGAGCATGTTGTTGGCTCTGTTCGCCGGCGGTGATGGGTATAGGGTGGAGGAGAACAATGGGTGCCTCATGCTTGGGTGGCACACGAGGCCACTCATCGCCACCTCCGCGTGGAAGCTTCCAGCCGGTGAGTCATAG 1815 0.5433 MKRDHQSSYGGGSVKGECSSMSSGKAKMWDEEHAAAAATVGGGVDELLAALGYNVRSSDMADVAQKLEQLEMVMGTAKEDGICHLASDTVHYDPTDLYSWVQSMLTELNPSSTTTTTTTILDPSWNPQINDPIDPSSILANHTQQQIHNPTRIFNDDSEYDLRAIPGIAAYPPQQQQQNPHNETEIETSNKRLKPWPIESDSPPLPPPPPPTVSEPTRPVVLVDSQETGVRLVHTLMACAEAVQQENLKLADTLVKHIGLLAASQAGAMRKVASYFAQALARRIYRIYPEETLDSSFSDMLHMHFYESSPYLKFAHFTANQAILEAFAGAGSVHVIDFDLKQGMQWPALMQALALRVGGPPTFRLTGIGPPQPDNTDALQQVGLKLAQLAHTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSIEKVLGTVKKIKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSSSSSTGLAPPSQDLLMSELYLGRQICNVVACEGVDRVERHETLNQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPAGES 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00048 604 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3033g00048 604 MobiDBLite consensus disorder prediction 199 216 - -
Gabi3033g00048 604 ProSiteProfiles GRAS family profile. 223 598 IPR005202 -
Gabi3033g00048 604 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 176 594 IPR005202 -
Gabi3033g00048 604 Gene3D - 43 108 IPR038088 -
Gabi3033g00048 604 Pfam GRAS domain family 232 598 IPR005202 -
Gabi3033g00048 604 SMART DELLA_2 45 118 - -
Gabi3033g00048 604 Pfam Transcriptional regulator DELLA protein N terminal 45 111 IPR021914 -
Gabi3033g00048 604 Coils Coil 60 80 - -
Gabi3033g00048 604 MobiDBLite consensus disorder prediction 194 217 - -
Gabi3033g00048 604 FunFam DELLA protein GAI 43 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00048 Gabi-Chr3033 351054 353621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00048 1 599 GRAS Transcription Factor Family AT2G01570 59.040 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3033g00048 GRAS 6.3e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00048 K14494 - gmx:547719 855.899