Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00046 ATGAAGAGGGATCACCAATCTAGCTACGGAGGAGGGAGTGTGAAAGGTGAATGCTCGTCAATGTCGAGTGGCAAGGCCAAGATGTGGGATGAAGAACATGCCGCCGCCGCCGCCACAGTCGGCGGCGGCGTGGACGAGTTGCTGGCGGCTTTGGGTTACAACGTACGTTCTTCAGACATGGCTGACGTGGCTCAGAAGCTGGAACAGCTTGAGATGGTTATGGGAACTGCTAAGGAAGATGGAATTTGCCACCTTGCTTCTGACACCGTTCACTATGACCCAACCGATCTCTATTCATGGGTTCAAAGCATGCTCACAGAACTGAACCCTTCTTCCACCACCACTACCACCAACGACCTCAGAGCAATCCCTGGCATAGCAGCATACCCACCACAACAACAACAGCAAAACCCACACAACGAAACCGAAATCGAAACCAGCAACAAGCGATTGAAGCCATGGCCAATTGAATCAGATTCACCACCACTCCCGCCACCGCCACCACCAACAGTGTCAGAACCAACAAGACCCGTTGTTCTCGTTGACTCGCAGGAAACAGGGGTTCGTCTCGTTCACACTCTCATGGCTTGCGCCGAAGCTGTTCAGCAAGAGAATCTCAAGCTCGCTGACACGCTTGTCAAGCACATAGGTTTGCTCGCAGCGTCGCAAGCCGGAGCTATGAGGAAGGTAGCTTCTTACTTCGCACAAGCCCTTGCTCGGAGAATTTACCGAATCTACCCTGAGGAAACCCTAGATTCCTCTTTCTCCGACATGCTCCACATGCACTTTTACGAATCTTCCCCTTACCTGAAATTCGCACACTTCACAGCGAATCAGGCGATTCTCGAAGCCTTCGCCGGCGCCGGCAGTGTCCACGTCATCGATTTCGACCTCAAACAAGGGATGCAATGGCCGGCGCTGATGCAGGCCCTAGCATTGCGCGTCGGCGGTCCTCCGACTTTCCGGTTAACCGGAATCGGACCACCGCAGCCGGACAACACCGACGCGCTTCAACAGGTTGGGTTGAAGTTGGCTCAGCTGGCTCATACCATTGGGGTTCAGTTCGAATTTCGCGGATTCGTTTGCAACAGTTTGGCGGATCTTGACCCGAACATGCTCGAGATCCGACCCGGTGAGGCTGTTGCTGTTAACTCCGTTTTCGAGCTCCACCGCATGCTGGCCCGACCCGGATCCATTGAGAAGGTACTGGGTACTGTTAAGAAGATTAAGCCCAAGATTGTGACTATTGTTGAACAGGAAGCGAACCACAATGGACCGGTTTTTGTGGACCGGTTCACGGAGGCTCTGCATTATTATTCAAGCTTGTTTGACTCGCTGGAGGGTTCGTCTTCGTCGTCGTCGACCGGGTTGGCACCGCCGAGTCAGGACCTGCTGATGTCGGAGCTCTACCTTGGGAGGCAGATTTGCAACGTGGTGGCTTGCGAAGGGGTGGACCGGGTCGAGCGACACGAGACACTGAACCAGTGGAGGGGGAGGATGGGCTCGGCCGGTTTCGACCCGGTTCATCTCGGTTCGAACGCGTTCAAGCAAGCGAGCATGTTGTTGGCTCTGTTCGCCGGCGGTGATGGGTATAGGGTGGAGGAGAACAATGGGTGCCTCATGCTTGGGTGGCACACGAGGCCACTCATCGCCACCTCCGCGTGGAAGCTTCCAGCCGGTGAGTCATAG 1689 0.5506 MKRDHQSSYGGGSVKGECSSMSSGKAKMWDEEHAAAAATVGGGVDELLAALGYNVRSSDMADVAQKLEQLEMVMGTAKEDGICHLASDTVHYDPTDLYSWVQSMLTELNPSSTTTTTNDLRAIPGIAAYPPQQQQQNPHNETEIETSNKRLKPWPIESDSPPLPPPPPPTVSEPTRPVVLVDSQETGVRLVHTLMACAEAVQQENLKLADTLVKHIGLLAASQAGAMRKVASYFAQALARRIYRIYPEETLDSSFSDMLHMHFYESSPYLKFAHFTANQAILEAFAGAGSVHVIDFDLKQGMQWPALMQALALRVGGPPTFRLTGIGPPQPDNTDALQQVGLKLAQLAHTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSIEKVLGTVKKIKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSSSSSTGLAPPSQDLLMSELYLGRQICNVVACEGVDRVERHETLNQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPAGES 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00046 562 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3033g00046 562 Pfam GRAS domain family 190 556 IPR005202 -
Gabi3033g00046 562 MobiDBLite consensus disorder prediction 157 174 - -
Gabi3033g00046 562 FunFam DELLA protein GAI 43 108 - -
Gabi3033g00046 562 SMART DELLA_2 45 118 - -
Gabi3033g00046 562 Gene3D - 43 108 IPR038088 -
Gabi3033g00046 562 ProSiteProfiles GRAS family profile. 181 556 IPR005202 -
Gabi3033g00046 562 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 137 552 IPR005202 -
Gabi3033g00046 562 MobiDBLite consensus disorder prediction 152 175 - -
Gabi3033g00046 562 Pfam Transcriptional regulator DELLA protein N terminal 45 111 IPR021914 -
Gabi3033g00046 562 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00046 Gabi-Chr3033 351054 353621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00046 41 557 GRAS Transcription Factor Family AT1G14920 65.458 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3033g00046 GRAS 5.1e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00046 K14494 - gmx:100799695 820.076