Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00045 ATGAAGAGGGATCACCAATCTAGCTACGGAGGAGGGAGTGTGAAAGGTGAATGCTCGTCAATGTCGAGTGGCAAGGCCAAGATGTGGGATGAAGAACATGCCGCCGCCGCCGCCACAGTCGGCGGCGGCGTGGACGAGTTGCTGGCGGCTTTGGGTTACAACGTACGTTCTTCAGACATGGCTGACGTGGCTCAGAAGCTGGAACAGCTTGAGATGGTTATGGGAACTGCTAAGGAAGATGGAATTTGCCACCTTGCTTCTGACACCGTTCACTATGACCCAACCGATCTCTATTCATGGGTTCAAAGCATGCTCACAGAACTGAACCCTTCTTCCACCACCACTACCACAACAAGAATATTCAACGACGATTCAGAATACGACCTCAGAGCAATCCCTGGCATAGCAGCATACCCACCACAACAACAACAGCAAAACCCACACAACGAAACCGAAATCGAAACCAGCAACAAGCGATTGAAGCCATGGCCAATTGAATCAGATTCACCACCACTCCCGCCACCGCCACCACCAACAGTGTCAGAACCAACAAGACCCGTTGTTCTCGTTGACTCGCAGGAAACAGGGGTTCGTCTCGTTCACACTCTCATGGCTTGCGCCGAAGCTGTTCAGCAAGAGAATCTCAAGCTCGCTGACACGCTTGTCAAGCACATAGGTTTGCTCGCAGCGTCGCAAGCCGGAGCTATGAGGAAGGTAGCTTCTTACTTCGCACAAGCCCTTGCTCGGAGAATTTACCGAATCTACCCTGAGGAAACCCTAGATTCCTCTTTCTCCGACATGCTCCACATGCACTTTTACGAATCTTCCCCTTACCTGAAATTCGCACACTTCACAGCGAATCAGGCGATTCTCGAAGCCTTCGCCGGCGCCGGCAGTGTCCACGTCATCGATTTCGACCTCAAACAAGGGATGCAATGGCCGGCGCTGATGCAGGCCCTAGCATTGCGCGTCGGCGGTCCTCCGACTTTCCGGTTAACCGGAATCGGACCACCGCAGCCGGACAACACCGACGCGCTTCAACAGGTTGGGTTGAAGTTGGCTCAGCTGGCTCATACCATTGGGGTTCAGTTCGAATTTCGCGGATTCGTTTGCAACAGTTTGGCGGATCTTGACCCGAACATGCTCGAGATCCGACCCGGTGAGGCTGTTGCTGTTAACTCCGTTTTCGAGCTCCACCGCATGCTGGCCCGACCCGGATCCATTGAGAAGGTACTGGGTACTGTTAAGAAGATTAAGCCCAAGATTGTGACTATTGTTGAACAGGAAGCGAACCACAATGGACCGGTTTTTGTGGACCGGTTCACGGAGGCTCTGCATTATTATTCAAGCTTGTTTGACTCGCTGGAGGGTTCGTCTTCGTCGTCGTCGACCGGGTTGGCACCGCCGAGTCAGGACCTGCTGATGTCGGAGCTCTACCTTGGGAGGCAGATTTGCAACGTGGTGGCTTGCGAAGGGGTGGACCGGGTCGAGCGACACGAGACACTGAACCAGTGGAGGGGGAGGATGGGCTCGGCCGGTTTCGACCCGGTTCATCTCGGTTCGAACGCGTTCAAGCAAGCGAGCATGTTGTTGGCTCTGTTCGCCGGCGGTGATGGGTATAGGGTGGAGGAGAACAATGGGTGCCTCATGCTTGGGTGGCACACGAGGCCACTCATCGCCACCTCCGCGTGGAAGCTTCCAGCCGGTGAGTCATAG 1716 0.5466 MKRDHQSSYGGGSVKGECSSMSSGKAKMWDEEHAAAAATVGGGVDELLAALGYNVRSSDMADVAQKLEQLEMVMGTAKEDGICHLASDTVHYDPTDLYSWVQSMLTELNPSSTTTTTTRIFNDDSEYDLRAIPGIAAYPPQQQQQNPHNETEIETSNKRLKPWPIESDSPPLPPPPPPTVSEPTRPVVLVDSQETGVRLVHTLMACAEAVQQENLKLADTLVKHIGLLAASQAGAMRKVASYFAQALARRIYRIYPEETLDSSFSDMLHMHFYESSPYLKFAHFTANQAILEAFAGAGSVHVIDFDLKQGMQWPALMQALALRVGGPPTFRLTGIGPPQPDNTDALQQVGLKLAQLAHTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSIEKVLGTVKKIKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSSSSSTGLAPPSQDLLMSELYLGRQICNVVACEGVDRVERHETLNQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPAGES 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00045 571 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3033g00045 571 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 146 561 IPR005202 -
Gabi3033g00045 571 Gene3D - 43 108 IPR038088 -
Gabi3033g00045 571 ProSiteProfiles GRAS family profile. 190 565 IPR005202 -
Gabi3033g00045 571 MobiDBLite consensus disorder prediction 161 184 - -
Gabi3033g00045 571 MobiDBLite consensus disorder prediction 166 183 - -
Gabi3033g00045 571 Pfam GRAS domain family 199 565 IPR005202 -
Gabi3033g00045 571 SMART DELLA_2 45 118 - -
Gabi3033g00045 571 Pfam Transcriptional regulator DELLA protein N terminal 45 111 IPR021914 -
Gabi3033g00045 571 Coils Coil 60 80 - -
Gabi3033g00045 571 FunFam DELLA protein GAI 43 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00045 Gabi-Chr3033 351054 353621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00045 41 566 GRAS Transcription Factor Family AT1G14920 64.728 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3033g00045 GRAS 5.4e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00045 K14494 - gmx:100799695 847.81