Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00043 ATGAAGAGGGATCACCAATCTAGCTACGGAGGAGGGAGTGTGAAAGGTGAATGCTCGTCAATGTCGAGTGGCAAGGCCAAGATGTGGGATGAAGAACATGCCGCCGCCGCCGCCACAGTCGGCGGCGGCGTGGACGAGTTGCTGGCGGCTTTGGGTTACAACGTACGTTCTTCAGACATGGCTGACGTGGCTCAGAAGCTGGAACAGCTTGAGATGGTTATGGGAACTGCTAAGGAAGATGGAATTTGCCACCTTGCTTCTGACACCGTTCACTATGACCCAACCGATCTCTATTCATGGGTTCAAAGCATGCTCACAGAACTGAACCCTTCTTCCACCAATTCAGAATACGACCTCAGAGCAATCCCTGGCATAGCAGCATACCCACCACAACAACAACAGCAAAACCCACACAACGAAACCGAAATCGAAACCAGCAACAAGCGATTGAAGCCATGGCCAATTGAATCAGATTCACCACCACTCCCGCCACCGCCACCACCAACAGTGTCAGAACCAACAAGACCCGTTGTTCTCGTTGACTCGCAGGAAACAGGGGTTCGTCTCGTTCACACTCTCATGGCTTGCGCCGAAGCTGTTCAGCAAGAGAATCTCAAGCTCGCTGACACGCTTGTCAAGCACATAGGTTTGCTCGCAGCGTCGCAAGCCGGAGCTATGAGGAAGGTAGCTTCTTACTTCGCACAAGCCCTTGCTCGGAGAATTTACCGAATCTACCCTGAGGAAACCCTAGATTCCTCTTTCTCCGACATGCTCCACATGCACTTTTACGAATCTTCCCCTTACCTGAAATTCGCACACTTCACAGCGAATCAGGCGATTCTCGAAGCCTTCGCCGGCGCCGGCAGTGTCCACGTCATCGATTTCGACCTCAAACAAGGGATGCAATGGCCGGCGCTGATGCAGGCCCTAGCATTGCGCGTCGGCGGTCCTCCGACTTTCCGGTTAACCGGAATCGGACCACCGCAGCCGGACAACACCGACGCGCTTCAACAGGTTGGGTTGAAGTTGGCTCAGCTGGCTCATACCATTGGGGTTCAGTTCGAATTTCGCGGATTCGTTTGCAACAGTTTGGCGGATCTTGACCCGAACATGCTCGAGATCCGACCCGGTGAGGCTGTTGCTGTTAACTCCGTTTTCGAGCTCCACCGCATGCTGGCCCGACCCGGATCCATTGAGAAGGTACTGGGTACTGTTAAGAAGATTAAGCCCAAGATTGTGACTATTGTTGAACAGGAAGCGAACCACAATGGACCGGTTTTTGTGGACCGGTTCACGGAGGCTCTGCATTATTATTCAAGCTTGTTTGACTCGCTGGAGGGTTCGTCTTCGTCGTCGTCGACCGGGTTGGCACCGCCGAGTCAGGACCTGCTGATGTCGGAGCTCTACCTTGGGAGGCAGATTTGCAACGTGGTGGCTTGCGAAGGGGTGGACCGGGTCGAGCGACACGAGACACTGAACCAGTGGAGGGGGAGGATGGGCTCGGCCGGTTTCGACCCGGTTCATCTCGGTTCGAACGCGTTCAAGCAAGCGAGCATGTTGTTGGCTCTGTTCGCCGGCGGTGATGGGTATAGGGTGGAGGAGAACAATGGGTGCCTCATGCTTGGGTGGCACACGAGGCCACTCATCGCCACCTCCGCGTGGAAGCTTCCAGCCGGTGAGTCATAG 1686 0.5486 MKRDHQSSYGGGSVKGECSSMSSGKAKMWDEEHAAAAATVGGGVDELLAALGYNVRSSDMADVAQKLEQLEMVMGTAKEDGICHLASDTVHYDPTDLYSWVQSMLTELNPSSTNSEYDLRAIPGIAAYPPQQQQQNPHNETEIETSNKRLKPWPIESDSPPLPPPPPPTVSEPTRPVVLVDSQETGVRLVHTLMACAEAVQQENLKLADTLVKHIGLLAASQAGAMRKVASYFAQALARRIYRIYPEETLDSSFSDMLHMHFYESSPYLKFAHFTANQAILEAFAGAGSVHVIDFDLKQGMQWPALMQALALRVGGPPTFRLTGIGPPQPDNTDALQQVGLKLAQLAHTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSIEKVLGTVKKIKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSSSSSTGLAPPSQDLLMSELYLGRQICNVVACEGVDRVERHETLNQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPAGES 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00043 561 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3033g00043 561 ProSiteProfiles GRAS family profile. 180 555 IPR005202 -
Gabi3033g00043 561 Pfam GRAS domain family 189 555 IPR005202 -
Gabi3033g00043 561 MobiDBLite consensus disorder prediction 151 174 - -
Gabi3033g00043 561 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 136 551 IPR005202 -
Gabi3033g00043 561 FunFam DELLA protein GAI 43 108 - -
Gabi3033g00043 561 Gene3D - 43 108 IPR038088 -
Gabi3033g00043 561 SMART DELLA_2 45 118 - -
Gabi3033g00043 561 MobiDBLite consensus disorder prediction 156 173 - -
Gabi3033g00043 561 Pfam Transcriptional regulator DELLA protein N terminal 45 111 IPR021914 -
Gabi3033g00043 561 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00043 Gabi-Chr3033 351053 353621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00043 41 556 GRAS Transcription Factor Family AT1G14920 66.157 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3033g00043 GRAS 5.1e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00043 K14494 - gmx:100799695 835.869