Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00041 ATGAAGAGGGATCACCAATCTAGCTACGGAGGAGGGAGTGTGAAAGGTGAATGCTCGTCAATGTCGAGTGGCAAGGCCAAGATGTGGGATGAAGAACATGCCGCCGCCGCCGCCACAGTCGGCGGCGGCGTGGACGAGTTGCTGGCGGCTTTGGGTTACAACGTACGTTCTTCAGACATGGCTGACGTGGCTCAGAAGCTGGAACAGCTTGAGATGGTTATGGGAACTGCTAAGGAAGATGGAATTTGCCACCTTGCTTCTGACACCGTTCACTATGACCCAACCGATCTCTATTCATGGGTTCAAAGCATGCTCACAGAACTGAACCCTTCTTCCACCACCACTACCACCACCACAGACGATTCAGAATACGACCTCAGAGCAATCCCTGGCATAGCAGCATACCCACCACAACAACAACAGCAAAACCCACACAACGAAACCGAAATCGAAACCAGCAACAAGCGATTGAAGCCATGGCCAATTGAATCAGATTCACCACCACTCCCGCCACCGCCACCACCAACAGTGTCAGAACCAACAAGACCCGTTGTTCTCGTTGACTCGCAGGAAACAGGGGTTCGTCTCGTTCACACTCTCATGGCTTGCGCCGAAGCTGTTCAGCAAGAGAATCTCAAGCTCGCTGACACGCTTGTCAAGCACATAGGTTTGCTCGCAGCGTCGCAAGCCGGAGCTATGAGGAAGGTAGCTTCTTACTTCGCACAAGCCCTTGCTCGGAGAATTTACCGAATCTACCCTGAGGAAACCCTAGATTCCTCTTTCTCCGACATGCTCCACATGCACTTTTACGAATCTTCCCCTTACCTGAAATTCGCACACTTCACAGCGAATCAGGCGATTCTCGAAGCCTTCGCCGGCGCCGGCAGTGTCCACGTCATCGATTTCGACCTCAAACAAGGGATGCAATGGCCGGCGCTGATGCAGGCCCTAGCATTGCGCGTCGGCGGTCCTCCGACTTTCCGGTTAACCGGAATCGGACCACCGCAGCCGGACAACACCGACGCGCTTCAACAGGTTGGGTTGAAGTTGGCTCAGCTGGCTCATACCATTGGGGTTCAGTTCGAATTTCGCGGATTCGTTTGCAACAGTTTGGCGGATCTTGACCCGAACATGCTCGAGATCCGACCCGGTGAGGCTGTTGCTGTTAACTCCGTTTTCGAGCTCCACCGCATGCTGGCCCGACCCGGATCCATTGAGAAGGTACTGGGTACTGTTAAGAAGATTAAGCCCAAGATTGTGACTATTGTTGAACAGGAAGCGAACCACAATGGACCGGTTTTTGTGGACCGGTTCACGGAGGCTCTGCATTATTATTCAAGCTTGTTTGACTCGCTGGAGGGTTCGTCTTCGTCGTCGTCGACCGGGTTGGCACCGCCGAGTCAGGACCTGCTGATGTCGGAGCTCTACCTTGGGAGGCAGATTTGCAACGTGGTGGCTTGCGAAGGGGTGGACCGGGTCGAGCGACACGAGACACTGAACCAGTGGAGGGGGAGGATGGGCTCGGCCGGTTTCGACCCGGTTCATCTCGGTTCGAACGCGTTCAAGCAAGCGAGCATGTTGTTGGCTCTGTTCGCCGGCGGTGATGGGTATAGGGTGGAGGAGAACAATGGGTGCCTCATGCTTGGGTGGCACACGAGGCCACTCATCGCCACCTCCGCGTGGAAGCTTCCAGCCGGTGAGTCATAG 1707 0.5495 MKRDHQSSYGGGSVKGECSSMSSGKAKMWDEEHAAAAATVGGGVDELLAALGYNVRSSDMADVAQKLEQLEMVMGTAKEDGICHLASDTVHYDPTDLYSWVQSMLTELNPSSTTTTTTTDDSEYDLRAIPGIAAYPPQQQQQNPHNETEIETSNKRLKPWPIESDSPPLPPPPPPTVSEPTRPVVLVDSQETGVRLVHTLMACAEAVQQENLKLADTLVKHIGLLAASQAGAMRKVASYFAQALARRIYRIYPEETLDSSFSDMLHMHFYESSPYLKFAHFTANQAILEAFAGAGSVHVIDFDLKQGMQWPALMQALALRVGGPPTFRLTGIGPPQPDNTDALQQVGLKLAQLAHTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSIEKVLGTVKKIKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSSSSSTGLAPPSQDLLMSELYLGRQICNVVACEGVDRVERHETLNQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPAGES 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00041 568 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3033g00041 568 MobiDBLite consensus disorder prediction 163 180 - -
Gabi3033g00041 568 Pfam GRAS domain family 196 562 IPR005202 -
Gabi3033g00041 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 142 558 IPR005202 -
Gabi3033g00041 568 Pfam Transcriptional regulator DELLA protein N terminal 45 111 IPR021914 -
Gabi3033g00041 568 Gene3D - 43 108 IPR038088 -
Gabi3033g00041 568 ProSiteProfiles GRAS family profile. 187 562 IPR005202 -
Gabi3033g00041 568 SMART DELLA_2 45 118 - -
Gabi3033g00041 568 MobiDBLite consensus disorder prediction 158 181 - -
Gabi3033g00041 568 Coils Coil 60 80 - -
Gabi3033g00041 568 FunFam DELLA protein GAI 43 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00041 Gabi-Chr3033 351053 353622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00041 41 563 GRAS Transcription Factor Family AT1G14920 65.094 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi3033g00041 GRAS 5.3e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00041 K14494 - gmx:100799695 839.336