Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00035 ATGGAGAACATTTTGGGTCTGCTCAGAATTCATGTTGAAAGAGGGGTCAATCTTGCTATCAGGGATGTAGTGAGCAGTGACCCTTATGTGATCATCAAAATGGGCAAGCAGAAGCTGAAGACTCGTGTAGTAAAGAAGAATCTAAATCCTGAGTGGAATGATGACTTGACTTTGTCCATTTCTGATCCTCATGCACCAGTCCAACTATTTGTGTATGACAAGGACAGATTTAGCTTGGATGACAAAATGGGGGATGCTGAGTTTTCCATTGGTCCATTTCTTGAAGCAGTGAAGATGCGTTTGGAAGATCTTCCTAATGACACCATAGTTACAAGTGAGAAACCTAGCAGACAAAATTGCTTAGCAGAAGAGAGTAAAATTGTGTGGAAAGATGGCAAAGTTATCCAAAAAATGGTTCTTAGACTAAGAAATGTTGAGTGTGGGGAAGTGGAGCTCCAGTTGGATTGGATTGAGGTTCCTGGTTCAAAGAAACTGTAG 498 0.4116 MENILGLLRIHVERGVNLAIRDVVSSDPYVIIKMGKQKLKTRVVKKNLNPEWNDDLTLSISDPHAPVQLFVYDKDRFSLDDKMGDAEFSIGPFLEAVKMRLEDLPNDTIVTSEKPSRQNCLAEESKIVWKDGKVIQKMVLRLRNVECGEVELQLDWIEVPGSKKL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00035 165 CDD C2_ArfGAP 5 148 - -
Gabi3033g00035 165 Gene3D C2 domain 3 164 IPR035892 -
Gabi3033g00035 165 Pfam C2 domain 6 92 IPR000008 -
Gabi3033g00035 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gabi3033g00035 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 164 IPR044562 -
Gabi3033g00035 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Gabi3033g00035 165 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00035 Gabi-Chr3033 313655 315597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00035 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 2.10e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00035 - - gmx:100306214 283.108