Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00034 ATGGAGAACATTTTGGGTCTGCTCAGAATTCATGTTGAAAGAGGGGTCAATCTTGCTATCAGGGATGTAGTGAGCAGTGACCCTTATGTGATCATCAAAATGGGCAAGCAGGTCAGGTTTTTCCACTTCTGGCAGAAGCTGAAGACTCGTGTAGTAAAGAAGAATCTAAATCCTGAGTGGAATGATGACTTGACTTTGTCCATTTCTGATCCTCATGCACCAGTCCAACTATTTGTGTATGACAAGGACAGATTTAGCTTGGATGACAAAATGGGGGATGCTGAGTTTTCCATTGGTCCATTTCTTGAAGCAGTGAAGATGCGTTTGGAAGATCTTCCTAATGACACCATAGTTACAAGTGAGAAACCTAGCAGACAAAATTGCTTAGCAGAAGAGAGTAAAATTGTGTGGAAAGATGGCAAAGTTATCCAAAAAATGGTTCTTAGACTAAGAAATGTTGAGTGTGGGGAAGTGGAGCTCCAGTTGGATTGGATTGAGGTTCCTGGTTCAAAGAAACTGTAG 522 0.4157 MENILGLLRIHVERGVNLAIRDVVSSDPYVIIKMGKQVRFFHFWQKLKTRVVKKNLNPEWNDDLTLSISDPHAPVQLFVYDKDRFSLDDKMGDAEFSIGPFLEAVKMRLEDLPNDTIVTSEKPSRQNCLAEESKIVWKDGKVIQKMVLRLRNVECGEVELQLDWIEVPGSKKL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00034 173 SMART C2_3c 7 110 IPR000008 -
Gabi3033g00034 173 Gene3D C2 domain 3 172 IPR035892 -
Gabi3033g00034 173 Pfam C2 domain 6 100 IPR000008 -
Gabi3033g00034 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 172 IPR044562 -
Gabi3033g00034 173 CDD C2_ArfGAP 5 156 - -
Gabi3033g00034 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 108 IPR035892 -
Gabi3033g00034 173 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00034 Gabi-Chr3033 313649 315597 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00034 46 173 C2H2 Transcription Factor Family AT1G70790 59.231 4.26e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00034 - - gmx:100306214 275.789