Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00032 ATGGAGAACATTTTGGGTCTGCTCAGAATTCATGTTGAAAGAGGGGTCAATCTTGCTATCAGGGATGTAGTGAGCAGTGACCCTTATGTGATCATCAAAATGGGCAAGCAGGTCAGGTTTCTCCACTTCTGGCAGAAGCTGAAGACTCGTGTAGTGAAGAAGAATCTAAATCCTGAGTGGAACGATGACTTGACTTTGTCCATTTCTGATCCTCATGCACCAGTCCAACTATTTGTGTATGACAAGGACATACTTAGCTTGGATGACAAAATGGGGGATGCTGAGTTTTCCATTGGTCCATTTCTGGAAGCAGTGAAGATGCGTTTGGAAGGTCTTCCTAATGACACTATAGTTACAAGTGAGAAACCTAGCAGACAGAATTGCTTAGCAGAAGAGAGTAAAATTGTGTGGAAAGATGGCAAAGTTATCCAAAAAATGGTTCTTAGACTAAGAAATGTTGAGCGTGGGGAAGTGGAGCTCCAGTTGGATTGGATTGACATTCCTGGTTCAAAGAAACTGTAG 522 0.4253 MENILGLLRIHVERGVNLAIRDVVSSDPYVIIKMGKQVRFLHFWQKLKTRVVKKNLNPEWNDDLTLSISDPHAPVQLFVYDKDILSLDDKMGDAEFSIGPFLEAVKMRLEGLPNDTIVTSEKPSRQNCLAEESKIVWKDGKVIQKMVLRLRNVERGEVELQLDWIDIPGSKKL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00032 173 SMART C2_3c 7 110 IPR000008 -
Gabi3033g00032 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 99 IPR035892 -
Gabi3033g00032 173 Gene3D C2 domain 3 172 IPR035892 -
Gabi3033g00032 173 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Gabi3033g00032 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 172 IPR044562 -
Gabi3033g00032 173 CDD C2_ArfGAP 5 156 - -
Gabi3033g00032 173 Pfam C2 domain 6 100 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00032 Gabi-Chr3033 301001 302911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00032 46 173 C2H2 Transcription Factor Family AT1G70790 57.692 7.94e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00032 - - pvu:PHAVU_001G230800g 276.944