Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3033g00009 ATGGCGAAGGAAGTTGGCGTTCCCTTCCCAAGGCTGCAGGTTATATCAGGGTTGCATCGTTGTGGCAAAAGCTGTAGGTTGAGATGGATAAATTATCTACGACCAGACATTAAACGTGGCAATTTTGGCCAAGATGAAGAAGACCTCATCATCAAACTCCATGCCCTCCTTGGCAATCGGTGGTCACTCATAGCTGGAAGATTGCCAGGACGAACAGATAACGAAGTGAAGAACTATTGGAATTCTCACATACGCAGAAAGTTAATAAAGATGGGAATTGATCCAAATAATCATAAGCTACACCGAAGCTTCCCTGTTCGACATGCTCACAATGTTTCTGCTACCAGTGCACCATCATCTGGGTCATTGAACAATAGAGTCCCTTTAATCAAATCCAATGGTTCAGATACAATGAGTTTTTGTCATGTAGAAACAGCAGTGGTTAATTCTTCTTCTTCATCCCACTTAAATCTTGACCTAACCATTGCTTTCCCTTCGCCTAAACTTGTTCCAGCTGTGGAAGACAAACCTAAACCTATTTCTGAGTTCTCTAACACAAGAAAAATCGATGATGATTCCGCTCCTACCCTTCTTCTGTTTCGATAA 606 0.4208 MAKEVGVPFPRLQVISGLHRCGKSCRLRWINYLRPDIKRGNFGQDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKLHRSFPVRHAHNVSATSAPSSGSLNNRVPLIKSNGSDTMSFCHVETAVVNSSSSSHLNLDLTIAFPSPKLVPAVEDKPKPISEFSNTRKIDDDSAPTLLLFR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3033g00009 201 SMART sant 38 86 IPR001005 -
Gabi3033g00009 201 CDD SANT 41 84 IPR001005 -
Gabi3033g00009 201 Gene3D - 41 108 - -
Gabi3033g00009 201 Gene3D - 2 38 - -
Gabi3033g00009 201 ProSiteProfiles Myb-like domain profile. 34 84 IPR001005 -
Gabi3033g00009 201 Pfam Myb-like DNA-binding domain 39 83 IPR001005 -
Gabi3033g00009 201 FunFam Transcription repressor MYB4 41 107 - -
Gabi3033g00009 201 PANTHER MYB DOMAIN PROTEIN 55 16 156 - -
Gabi3033g00009 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 88 IPR017930 -
Gabi3033g00009 201 SUPERFAMILY Homeodomain-like 19 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3033g00009 Gabi-Chr3033 98353 99926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3033g00009 16 165 MYB Transcription Factor Family AT4G38620 51.220 2.82e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi3033g00009 Myb_DNA-binding 4.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3033g00009 K09422 - gmx:100793444 216.083