Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi302g00011 ATGGTGGAAAAAACAAACTTGGCAGGTGATGCGGCGATGGAAACCGCCCTGTTCGGGAAGTACGAGCTAGGTCGAGTCCTGGGCTGCGGCGCGTTCGCAAAAGTGTACTACGCGCGGAACGTGCACACGGGGCAGAGCGTGGCGGTGAAGATCATCAACAAGAAGAAGCTCGCTGGAACGGCACTCGCCGGCCACGTGAAGCGCGAGATAAGCATCATGAGCCGCCTCCACCACCCATACATCGTGCGCCTCCACGAGGTCCTCGCAACGAAGACGAAGATCTTCTTCGTCATGGACTTCGTTCGCGGTGGCGAGCTCTTCGAGAAAATCTCAAAGGGTCGCTTCTCCGAGGATCTCAGCCGTCGCTACTTCCACCAATTAGTCTCCGCCATCGGATACTGCCACTCCCGCGGCGTTTTCCACCGTGACCTCAAGCCGGAGAATCTCCTTCTCGACGAGAATGGTGATTTGAAGGTTTCGGATTTTGGGTTAAGTGCTGTTAGGGATCAGATCCGACCCGACGGGTTGCTCCATACCCTTTGCGGCACACCCGCTTACGTGGCACCGGAGATTCTTGCCAAGAAAGGTTATGATGGGGCCAAGGTTGATGTTTGGTCATGCGGCGTCGTTTTGTTTGTTCTCGCTGCCGGGTACCTTCCGTTTAATGACCCGAATTTGATGGGGATGTACAGAAAGATTTACAAAGGGGAATTCCGGTGTCCTCGGTGGATGTCGCCGGAGCTCCGTCGGTTCCTAAAGCGGTTACTTGATACCAACCCGGAAACCCGGATGACCGTTGATGGGATAACCCGGGACCCGTGGTTCAGGAAGGACTACAAGGCGATCAAGTTTCACGAGGAGGATTATGGGTCCGGGTTCGGGTCCGGGTCGAAGGGTGATGGGTTTGAGAGGGTGTTAGATTTGAACGCGTTTGATATCATATCGTTTTCGTCAGGTTTGAATCTTTCCGGGTTGTTTGGGGAGTCTGAAGGCGGAGAGAGGTTGGTGTTGCGGGATTCGCCGGAAATGATTTTGGAGACGGTGGAGGAGGTGGGTGTGGCGGAGGGGATGGCGGTGAGGTGGAAGAAGGAATGTGGGGTGGAGCTGGAAGGGCTGAATGGGAATTTCGGAATTGGGATTGAGGTTCACCGGTTAACGGCGGAGCTCGCGGTGGTTGAGGTTAGGAGTAGGGGCGGCGACGCCGTTGATGTGTGGGACAACAAGCTCAAGCCTCAGCTCCTTGGTGGTGCAACGACGTCGCATCATCTTGAACCTGAACCTGAACCTGAGCCGCAGGTTGCCGGTGACTAA 1311 0.5561 MVEKTNLAGDAAMETALFGKYELGRVLGCGAFAKVYYARNVHTGQSVAVKIINKKKLAGTALAGHVKREISIMSRLHHPYIVRLHEVLATKTKIFFVMDFVRGGELFEKISKGRFSEDLSRRYFHQLVSAIGYCHSRGVFHRDLKPENLLLDENGDLKVSDFGLSAVRDQIRPDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGVVLFVLAAGYLPFNDPNLMGMYRKIYKGEFRCPRWMSPELRRFLKRLLDTNPETRMTVDGITRDPWFRKDYKAIKFHEEDYGSGFGSGSKGDGFERVLDLNAFDIISFSSGLNLSGLFGESEGGERLVLRDSPEMILETVEEVGVAEGMAVRWKKECGVELEGLNGNFGIGIEVHRLTAELAVVEVRSRGGDAVDVWDNKLKPQLLGGATTSHHLEPEPEPEPQVAGD 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi302g00011 436 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Gabi302g00011 436 MobiDBLite consensus disorder prediction 415 436 - -
Gabi302g00011 436 Gene3D Kinase associated domain 1, KA1 305 415 - -
Gabi302g00011 436 Pfam NAF domain 308 360 IPR004041 GO:0007165
Gabi302g00011 436 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi302g00011 436 SUPERFAMILY Protein kinase-like (PK-like) 18 282 IPR011009 -
Gabi302g00011 436 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi302g00011 436 CDD CIPK_C 309 413 - -
Gabi302g00011 436 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi302g00011 436 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Gabi302g00011 436 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Gabi302g00011 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 397 - -
Gabi302g00011 436 Gene3D Transferase(Phosphotransferase) domain 1 12 292 - -
Gabi302g00011 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Gabi302g00011 436 FunFam Non-specific serine/threonine protein kinase 11 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi302g00011 Gabi-Chr302 131283 142602 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi302g00011 8 414 CBL-interacting serine-threonine protein kinases AT2G30360 65.632 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi302g00011 Pkinase 3.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi302g00011 - - gmx:100799169 674.855