Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi302g00001 ATGGCAATTTCTTCTTCTCGTTCTTCTTCTTTCTCTTCATTATCTTCAGCTATTGTTGCATTAGCTGTGTTCCTGCTTCTTACAGGGACCTCTTCAGCTCAACTCTCTGAGAACTTTTATTCTAAGAAATGTCCAAAGGTTTTCGACGCTGTAGAATCTGTTGTTAAAACTGCTGTGGCTAAAGAACGTCGCATGGGAGCATCTCTCCTTCGCCTCTTTTTCCATGATTGCTTTGTTGATGGTTGTGATGGGTCATTACTACTTGATGACACTTCAACTTTCAAAGGAGAGAAAACTGCAGCTCCGAACAACAATTCTGTGAGAGGTTTTGAAGTAATTGATGCTATCAAATCTAAGGTGGAACAAGTATGCCCCGGTGTGGTGTCATGTGCTGATATCTTGGCCATTACTTCTCGTGACTCTGTTGTCATCCTTGGAGGACCTTCTTGGAATGTTAAACTTGGAAGAAGGGATTCAACGACAGCAAATTTCACTGCTGCAAACACTGGTGTGATTCCAGCTCCTACATCTAATCTAAGCATCCTTATCTCAACCTTCAAAGCTCAAGGGCTCTCTGCCAAGGACATGGTTGCTTTATCTGGGTCTCACACAATTGGGAAAGCAAGGTGTACTAGTTTCAGAAATCGCATATATAATGAGACCAACATTAATAGTTCATTTGCTAAGTCAAGGCAGAGGAACTGTCCAAGGACTAGTGGCTCAGGAGACAACAATCTAGCAAATCTAGATTTCAGAACTCCTAATCATTTTGATAACAAGTACTACAAGAACCTCCTCATCAATAGGGGTCTCTTACATTCTGATCAGGTTCTCTTCAATGGTGGATCTACTGATTCACTTGTTAAAACATACAGCAAGAATAATAAGGCCTTTGATTGTGACTTTGTTAATGCAATGATTAAGATGGGAAACAATAAACCCTTAACTGGGTCACAAGGGGAGATTAGGAAGAACTGCAGGAGAACTAATTAG 993 0.4079 MAISSSRSSSFSSLSSAIVALAVFLLLTGTSSAQLSENFYSKKCPKVFDAVESVVKTAVAKERRMGASLLRLFFHDCFVDGCDGSLLLDDTSTFKGEKTAAPNNNSVRGFEVIDAIKSKVEQVCPGVVSCADILAITSRDSVVILGGPSWNVKLGRRDSTTANFTAANTGVIPAPTSNLSILISTFKAQGLSAKDMVALSGSHTIGKARCTSFRNRIYNETNINSSFAKSRQRNCPRTSGSGDNNLANLDFRTPNHFDNKYYKNLLINRGLLHSDQVLFNGGSTDSLVKTYSKNNKAFDCDFVNAMIKMGNNKPLTGSQGEIRKNCRRTN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi302g00001 330 CDD secretory_peroxidase 34 329 IPR033905 GO:0004601|GO:0042744
Gabi302g00001 330 FunFam Peroxidase 173 309 - -
Gabi302g00001 330 ProSiteProfiles Plant heme peroxidase family profile. 34 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 Gene3D - 38 327 - -
Gabi302g00001 330 PANTHER PEROXIDASE 72-RELATED 32 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Gabi302g00001 330 SUPERFAMILY Heme-dependent peroxidases 34 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Gabi302g00001 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 FunFam Peroxidase 38 180 - -
Gabi302g00001 330 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi302g00001 330 Gene3D Peroxidase, domain 2 173 309 - -
Gabi302g00001 330 Pfam Peroxidase 51 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi302g00001 Gabi-Chr302 14742 17751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi302g00001 33 330 Peroxidase AT5G05340 69.799 3.57e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi302g00001 K00430 - gmx:100813384 516.538