Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3027g00026 ATGGATCACTCCCAAATAATAACTATTGAAGACATTGACGTGAGTGGGAGTTTATCACGTTATGATGATGTTGTTGATTTGGAGAAAGACACTGATGAGTTTGTTGATGATGATAAGTGTGAAATTATGGAAGATGAAGATGGTGATCATGTGCAAAATGATGTACTTGAAATTGTGGGAGATGATATCAATGAATTTAGTGAGACTAGTTTTTTATGTAGGGTCTTTGGGACATCAGAAGAAGCTTATGTTTTTTATAATGATCATGCAAAAGGTAAGGGGTTTGGAATACGTAAGCAATTTTTTAACAAGAGTGCAAGAACACAACAAATATATAGGTGGAGATATGTGTGTTCGAAAGAAGGCATCAAGAAAGTGAATGATAAAGTAGTTAAAAGGCGAAGGGATACAAGGACTAATTGTTTGGCGATGTTACAAATAAAGTTGGTGGATGGAGTATGGAAAGTGGAGAAGTTCAATGATACACACAATCATCCATTGATTAACACTCCATCAAAGGTGAAGAAGTTTTCTTCTCAGAATGAATTACGACGCTCAAAGTTTACTAAATCTCTTGTTTCTATGCTTTCTGAGGAGGGTTTAACTTCTTCAAAAATCTCAAAGGTGGTGAATGCTATGGACAAAGAAGTTAATATTACTCCAGTGCAAATCTCCACTATTATATCAAGCCAACGAAAGAATAATGTGGGGCGAGAATGTCAAGGCATCATTAAACACTTTCAAAGGAAGTCTGTTCTTGATGGATCTTTTTATTTTGATATGCATTTAGCCGAAGATGGAACATTAAGAAGCGTATTCTGGGCGGATGGTAGGTCAAGAGCAGCATATGTTCAATTTGGTGATGTTCTTGTGTTTGATGTGTCTTACCAAACAAATAAGTTCAAGTTTCCCTTTGCCCCTTTCGTTGGGGTTAATCACCATGGGCAATCAATTTTATTTGCAGCCGCTTTGTTAGAAGATGAAACAGAGGCAACATTTACATGGTTGTTTGAACAATTTCTGGAATGTATGTTTGATAAGTCTCCTATTGCTATTATCACTGATCAAGACAAAGCTATTGGAAAAGCAATTGCCAAAATATTTCCAAAAGCACGACATCGTTTTTGTGCGTGGCACATGAAAAAACATGTTATGGAACACACTCAAGCACTACGCTCACAATTTAAGGAGAGTTTTGATGTTGACTTTCGTGCATGGTATAAAAGTCGAAGCATTGATGAGTTTGAAGGCAGTTGGGAATCATTGAAGACTAAATATGATATTAAAGAAGGAACTTGGTTGGCTAACATGTATGTTTCACGTCATCATTGGGCAAAGGTATATTTGAAAGATACTTTTTGGGCTGGAATGACCACAAGTGGCCGAAGTGAGAGCATCAATGCTTTTTTTGATGGATACGTCAACTCCAACACAATGTTAAATGACTTTGTTACTCAATATGACAAAGCAATTAAGAGTAGGAGGGATGCTGAAGAAGATGAAGATTTTAAAACTAGAAATACAAAAGCAATTTTGGAGACTACTCATCAAATTGAAGCAATAGCTGGTGAGCGTTACACAAGAAAAATATTTAATATATTTAAAAAGGAGTGGATGGAAGCTGTTCTTCATTATGAGCATGAAAAGATTTTAATGAATGAAGATCTAATCAGGTACAAGGTGGGGTCTCACGAAGTTGATAAAGAGTGGTGGGCAATTGTTGACTATCATTTGACAGAAACCTTCACAGCTGATTGTGATCATGCTGATACACCCACTAAGGAAGTTAGTGCATTGTTCTTGTGGTCGCTTCACTCCAAGTGCAATATGGCTATTTCCGAAGCAAGAGATTGTATGTCTGAAATTAGAAAGTTTGATGATTTTCTTGCTGACTTTATTAGACAGCAACTGGAAAGAAAGAGAAATATAATTGAAGATGAAGCAATTCCCCAAGTTGTTCCTTCACTAACTCCCGAAATTCTTTCACAAGTTTCACTCATTAACTACGTGCGTGATCCCATGCATCCAGTCAAAACTAAAGGGCGTCCAAAGGTTGCTTCACGATTGAAATCAAGCATTGAGTTGATTTCAAAACAACATAAGACTTGTAGTTATTGTGGAGGAAAGGGTCACAATAAAACCAGTTGTGAGAAGCGCAAGATGGATATTGCAAGAGAGAAGCAAAAGGAGTACAAAGATAACTATTTGTCAGAAAATCATTCAGAGTATCAATTTGAATATGTGGAAGTCCTATCTGATTTTGATGAAGATGTTGGCATTAAAGTTGCTTATGTTGGCAAAGTGAAAGGGTTTGTTAGTCTCTTTCTGCAAAATGTGCAGTATGGAGTTCGCTTATTTTGTGTTCCACCTAATGAGTTATATAGGTTCTCGCATCAGATTCCTTCATATAAGATGGCTGGTGATGAAAGGGAAGAAAAACCAACTATGAGAATGGAAAAGTGA 2463 0.3658 MDHSQIITIEDIDVSGSLSRYDDVVDLEKDTDEFVDDDKCEIMEDEDGDHVQNDVLEIVGDDINEFSETSFLCRVFGTSEEAYVFYNDHAKGKGFGIRKQFFNKSARTQQIYRWRYVCSKEGIKKVNDKVVKRRRDTRTNCLAMLQIKLVDGVWKVEKFNDTHNHPLINTPSKVKKFSSQNELRRSKFTKSLVSMLSEEGLTSSKISKVVNAMDKEVNITPVQISTIISSQRKNNVGRECQGIIKHFQRKSVLDGSFYFDMHLAEDGTLRSVFWADGRSRAAYVQFGDVLVFDVSYQTNKFKFPFAPFVGVNHHGQSILFAAALLEDETEATFTWLFEQFLECMFDKSPIAIITDQDKAIGKAIAKIFPKARHRFCAWHMKKHVMEHTQALRSQFKESFDVDFRAWYKSRSIDEFEGSWESLKTKYDIKEGTWLANMYVSRHHWAKVYLKDTFWAGMTTSGRSESINAFFDGYVNSNTMLNDFVTQYDKAIKSRRDAEEDEDFKTRNTKAILETTHQIEAIAGERYTRKIFNIFKKEWMEAVLHYEHEKILMNEDLIRYKVGSHEVDKEWWAIVDYHLTETFTADCDHADTPTKEVSALFLWSLHSKCNMAISEARDCMSEIRKFDDFLADFIRQQLERKRNIIEDEAIPQVVPSLTPEILSQVSLINYVRDPMHPVKTKGRPKVASRLKSSIELISKQHKTCSYCGGKGHNKTSCEKRKMDIAREKQKEYKDNYLSENHSEYQFEYVEVLSDFDEDVGIKVAYVGKVKGFVSLFLQNVQYGVRLFCVPPNELYRFSHQIPSYKMAGDEREEKPTMRMEK 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3027g00026 820 Pfam Domain of unknown function (DUF3444) 737 809 IPR024593 -
Gabi3027g00026 820 Pfam FAR1 DNA-binding domain 85 168 IPR004330 -
Gabi3027g00026 820 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 558 IPR031052 GO:0006355
Gabi3027g00026 820 Pfam MULE transposase domain 289 382 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3027g00026 Gabi-Chr3027 241599 245485 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3027g00026 MULE 2.2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3027g00026 - - lsv:128127215 640.958