Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3027g00015 ATGATAGGATTAGGATGGGTGAATGGTATGAGTATGAGCAGTTTACTGCCATTTGTGGGAATGGTAGTGGCTCTTCTGACTCAAAGTGGGAGCATGGTGGTTATCAAAGTTGCCATGACTGATGGGATAAACAAGTATGTCATGCTTGTGTATTCTTTAGCACTCTCCTGCTTCATGCTTCTTCCCGTTGCCTTGCTTCTCCATAGGTCTGAGCGTCCTCCTCTCACGTTCTCTGCACTTAGAAGCTTCTTTTTGCTTGCTCTATTTGGAAGCTCAGCACAGATAATGGCTTATGTTGGCATAGAACTCAGCTCTCCTACTCTTGCCTCGGCCATGCTTAACCTCATTCCAGCTTTCACTTTTGTACTTGCTCTCATTTTCAGGATGGAAGAAGTATATTGGAGACATTTTAGTAGCCAAGCTAAAGTAATAGGAACTATAGTATCAATTACTGGAGCATTTGTTGTGATATTTTACAAGGGCCCACCAATCTTCAACACAAATTTGTCAGACTCTTCTAGCATACTTCAATTTTCACCACAGTCAAACTGGATCTTGGGAGGGTTGCTCTGTGCTGTTGATTCGTTCCTTTCTTCCATGTGGTACATATATCAGGTCTTATTTTCAACCATTCAGTCTGCAGTCTTTGCCTTTATTGCAGTTAGAGATCCAAGGGAATGGGAGCTAAAGCTTGATGTGGGGTTGATTGCCATTTTATACCAGGCAATATGTGCAACAGTGATACGCTACATCCTATGCACTTGGTGTGTCCAAAGAGCCGGACCTCTGTTTTGTGCTATGTTCAAGCCCATGGGAATCATCTTCACCGTTTTCATGAGTGCAATCTTTCTCGGGGATGATTTTAGACTTGGAAGTTTGATTGGGGCGGTTATAATCGTGATAGGATTTTATGCTGTGATGTGGGGAAAAGCAACAGAAGAGAAGATGGTTGAGAGAGAGATTAACAACTTGGAGTCGTCTTGCCATAATGTTCCTCTGTTACAAAACAAGGTGTAA 1017 0.4248 MIGLGWVNGMSMSSLLPFVGMVVALLTQSGSMVVIKVAMTDGINKYVMLVYSLALSCFMLLPVALLLHRSERPPLTFSALRSFFLLALFGSSAQIMAYVGIELSSPTLASAMLNLIPAFTFVLALIFRMEEVYWRHFSSQAKVIGTIVSITGAFVVIFYKGPPIFNTNLSDSSSILQFSPQSNWILGGLLCAVDSFLSSMWYIYQVLFSTIQSAVFAFIAVRDPREWELKLDVGLIAILYQAICATVIRYILCTWCVQRAGPLFCAMFKPMGIIFTVFMSAIFLGDDFRLGSLIGAVIIVIGFYAVMWGKATEEKMVEREINNLESSCHNVPLLQNKV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3027g00015 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 214 311 - -
Gabi3027g00015 338 Pfam EamA-like transporter family 21 157 IPR000620 GO:0016020
Gabi3027g00015 338 Pfam EamA-like transporter family 203 307 IPR000620 GO:0016020
Gabi3027g00015 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
Gabi3027g00015 338 PANTHER WAT1-RELATED PROTEIN 16 318 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3027g00015 Gabi-Chr3027 148923 152655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3027g00015 14 338 Nodulin-like Gene Family AT5G40240 40.115 2.85e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3027g00015 - - gmx:100792109 487.648