Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3027g00014 ATGATAGGATTAGGATGGGTGAATGGTATGAGTATGAGCAGTTTACTGCCATTTGTGGGAATGGTAGTGGCTCTTCTGACTCAAAGTGGGAGCATGGTGGTTATCAAAGTTGCCATGACTGATGGGATAAACAAGTATGTCATGCTTGTGTATTCTTTAGCACTCTCCTGCTTCATGCTTCTTCCCGTTGCCTTGCTTCTCCATAGGTCTGAGCGTCCTCCTCTCACGTTCTCTGCACTTAGAAGCTTCTTTTTGCTTGCTCTATTTGGAAGCTCAGCACAGATAATGGCTTATGTTGGCATAGAACTCAGCTCTCCTACTCTTGCCTCGGCCATGCTTAACCTCATTCCAGCTTTCACTTTTGTACTTGCTCTCATTTTCAGGATGGAAGAAGTATATTGGAGACATTTTAGTAGCCAAGCTAAAGTAATAGGAACTATAGTATCAATTACTGGAGCATTTGTTGTGATATTTTACAAGGGCCCACCAATCTTCAACACAAATTTGTCAGACTCTTCTAGCATACTTCAATTTTCACCACAGTCAAACTGGATCTTGGGAGGGTTGCTCTGTGCTGTTGATTCGTTCCTTTCTTCCATGTGGTACATATATCAGGCTTCAGTTGTAAAGAAATACCCTGCTGTAATAATCACAGTCTTCTTCCAGGTCTTATTTTCAACCATTCAGTCTGCAGTCTTTGCCTTTATTGCAGTTAGAGATCCAAGGGAATGGGAGCTAAAGCTTGATGTGGGGTTGATTGCCATTTTATACCAGGCAATATGTGCAACAGTGATACGCTACATCCTATGCACTTGGTGTGTCCAAAGAGCCGGACCTCTGTTTTGTGCTATGTTCAAGCCCATGGGAATCATCTTCACCGTTTTCATGAGTGCAATCTTTCTCGGGGATGATTTTAGACTTGGAAGTTTGATTGGGGCGGTTATAATCGTGATAGGATTTTATGCTGTGATGTGGGGAAAAGCAACAGAAGAGAAGATGGTTGAGAGAGAGATTAACAACTTGGAGTCGTCTTGCCATAATGTTCCTCTGTTACAAAACAAGGTGTAA 1068 0.4232 MIGLGWVNGMSMSSLLPFVGMVVALLTQSGSMVVIKVAMTDGINKYVMLVYSLALSCFMLLPVALLLHRSERPPLTFSALRSFFLLALFGSSAQIMAYVGIELSSPTLASAMLNLIPAFTFVLALIFRMEEVYWRHFSSQAKVIGTIVSITGAFVVIFYKGPPIFNTNLSDSSSILQFSPQSNWILGGLLCAVDSFLSSMWYIYQASVVKKYPAVIITVFFQVLFSTIQSAVFAFIAVRDPREWELKLDVGLIAILYQAICATVIRYILCTWCVQRAGPLFCAMFKPMGIIFTVFMSAIFLGDDFRLGSLIGAVIIVIGFYAVMWGKATEEKMVEREINNLESSCHNVPLLQNKV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3027g00014 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 328 - -
Gabi3027g00014 355 PANTHER WAT1-RELATED PROTEIN 16 335 IPR030184 GO:0016020|GO:0022857
Gabi3027g00014 355 Pfam EamA-like transporter family 21 157 IPR000620 GO:0016020
Gabi3027g00014 355 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020
Gabi3027g00014 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3027g00014 Gabi-Chr3027 148923 152655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3027g00014 14 355 Nodulin-like Gene Family AT5G40240 42.120 2.16e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3027g00014 - - gmx:100792109 520.005