Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3027g00013 ATGCAGGGCACAGCTACAGGTGTAACGACAGTAATGATTGCGGTGCAGTTCTTGCATGTGGGTTTGAACACTTTGATAAAAGCATCCATATCTAAAGGAATGAGCAATTTTGTTTTTGTTGCCTACTCAAACCTCCTCGCATTCTGTTTCCTGTTACCATCCACCATAATCTATCACAGAAGCAGAGCTCTTCCAACAATCAATACATGGATTATCTTCAGAATTTTTGTTCTTAGCTTGCTTAGCTGTTCCATACAGACGTTTATGTATACTGGAATTCGGTATAGCTCTCCCACTCTGGCCTCAGCCATGGAGGATCTCACTCCAGCTTATACTTTCATAATTGCCATCATTTTCAGGATGGAAAAGCTGGATCTAAAACTACGAAGTTGCCAGGCAAAATCCATTGGCACTGTGGTCTCCATTGCAGGAGCACTAACAGTGACTTTATACAAGGGCTTGCCTATGACTAATGGTGTGCTTCCAAACAATGTGCTTGGTGGGACTTTCCTCTCCTCACAGCAATCAGAATGGCTACTCGGAGGTTTTCTCCTTGCAGCTGCTAGTTTTTGTATTTCGACTTTGCTTGTCATGCAGACTTGGACTATCAAAGACTATCCTGCGGAGCTAATGCTAACAACCATTTGTTGCAGTTTCGTTGTTATCCTATCTTTCATGGTAGCTTTCATTGCAGAGGGAAATCCAAAGGCTTGGATACTTAAACCTGATATGGAGTTGATATCTATATTCTATTCAGCAATTTTTGTGATATCTATGCGAAGTGTGGTGCATACATGGGCATGTCGCAAGAAGGGGCCTTTATATGTTGCTATGTTCAATCCTTTAGGAATTGTCATTGCACTCGCCATGGGGGTTATATTTCTGGGTGATGCTCTATATCTTGGAAGCATGATAGGAGCTGCTATAATAGCTATTGGGTTTTATGCTGTGATATGGGGCCAGGCCCAAGATGAAAAGATGGTTAATGAAGAATATGGACAATGTAGCATTATCTCATCGTCTTCGTCTGCAGAGCCACTGTTAATGAACAAAAAGCAAGGACACGATTGA 1071 0.4192 MQGTATGVTTVMIAVQFLHVGLNTLIKASISKGMSNFVFVAYSNLLAFCFLLPSTIIYHRSRALPTINTWIIFRIFVLSLLSCSIQTFMYTGIRYSSPTLASAMEDLTPAYTFIIAIIFRMEKLDLKLRSCQAKSIGTVVSIAGALTVTLYKGLPMTNGVLPNNVLGGTFLSSQQSEWLLGGFLLAAASFCISTLLVMQTWTIKDYPAELMLTTICCSFVVILSFMVAFIAEGNPKAWILKPDMELISIFYSAIFVISMRSVVHTWACRKKGPLYVAMFNPLGIVIALAMGVIFLGDALYLGSMIGAAIIAIGFYAVIWGQAQDEKMVNEEYGQCSIISSSSSAEPLLMNKKQGHD 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3027g00013 356 Pfam EamA-like transporter family 180 318 IPR000620 GO:0016020
Gabi3027g00013 356 Pfam EamA-like transporter family 11 148 IPR000620 GO:0016020
Gabi3027g00013 356 PANTHER WAT1-RELATED PROTEIN 10 330 IPR030184 GO:0016020|GO:0022857
Gabi3027g00013 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Gabi3027g00013 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3027g00013 Gabi-Chr3027 141283 145165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3027g00013 12 327 Nodulin-like Gene Family AT5G40240 45.963 4.42e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3027g00013 - - gmx:100814600 477.633