Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3027g00012 ATGCAGGGCACAGCTACAGGTGTAACGACAGTAATGATTGCGGTGCAGTTCTTGCATGTGGGTTTGAACACTTTGATAAAAGCATCCATATCTAAAGGAATGAGCAATTTTGTTTTTGTTGCCTACTCAAACCTCCTCGCATTCTGTTTCCTGTTACCATCCACCATAATCTATCACAGAAGCAGAGCTCTTCCAACAATCAATACATGGATTATCTTCAGAATTTTTGTTCTTAGCTTGCTTAGCTGTTCCATACAGACGTTTATGTATACTGGAATTCGGTATAGCTCTCCCACTCTGGCCTCAGCCATGGAGGATCTCACTCCAGCTTATACTTTCATAATTGCCATCATTTTCAGGATGGAAAAGCTGGATCTAAAACTACGAAGTTGCCAGGCAAAATCCATTGGCACTGTGGTCTCCATTGCAGGAGCACTAACAGTGACTTTATACAAGGGCTTGCCTATGACTAATGGTGTGCTTCCAAACAATGTGCTTGGTGGGACTTTCCTCTCCTCACAGCAATCAGAATGGCTACTCGGAGGTTTTCTCCTTGCAGCTGCTAGTTTTTGTATTTCGACTTTGCTTGTCATGCAGGCAAGTGAATCTTACTCAAACATATCTCAAGAATGCGCATGCACTTTGTCCTCACATCTTGTAACTAAAATCACAGTGTTCTTATACATTATGCAGACTTGGACTATCAAAGACTATCCTGCGGAGCTAATGCTAACAACCATTTGTTGCAGTTTCGTTGTTATCCTATCTTTCATGGTAGCTTTCATTGCAGAGGGAAATCCAAAGGCTTGGATACTTAAACCTGATATGGAGTTGATATCTATATTCTATTCAGCAATTTTTGTGATATCTATGCGAAGTGTGGTGCATACATGGGCATGTCGCAAGAAGGGGCCTTTATATGTTGCTATGTTCAATCCTTTAGGAATTGTCATTGCACTCGCCATGGGGGTTATATTTCTGGGTGATGCTCTATATCTTGGAAGCATGATAGGAGCTGCTATAATAGCTATTGGGTTTTATGCTGTGATATGGGGCCAGGCCCAAGATGAAAAGATGGTTAATGAAGAATATGGACAATGTAGCATTATCTCATCGTCTTCGTCTGCAGAGCCACTGTTAATGAACAAAAAGCAAGGACACGATTGA 1167 0.4147 MQGTATGVTTVMIAVQFLHVGLNTLIKASISKGMSNFVFVAYSNLLAFCFLLPSTIIYHRSRALPTINTWIIFRIFVLSLLSCSIQTFMYTGIRYSSPTLASAMEDLTPAYTFIIAIIFRMEKLDLKLRSCQAKSIGTVVSIAGALTVTLYKGLPMTNGVLPNNVLGGTFLSSQQSEWLLGGFLLAAASFCISTLLVMQASESYSNISQECACTLSSHLVTKITVFLYIMQTWTIKDYPAELMLTTICCSFVVILSFMVAFIAEGNPKAWILKPDMELISIFYSAIFVISMRSVVHTWACRKKGPLYVAMFNPLGIVIALAMGVIFLGDALYLGSMIGAAIIAIGFYAVIWGQAQDEKMVNEEYGQCSIISSSSSAEPLLMNKKQGHD 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3027g00012 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Gabi3027g00012 388 PANTHER WAT1-RELATED PROTEIN 10 362 IPR030184 GO:0016020|GO:0022857
Gabi3027g00012 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 270 354 - -
Gabi3027g00012 388 Pfam EamA-like transporter family 227 350 IPR000620 GO:0016020
Gabi3027g00012 388 Pfam EamA-like transporter family 11 148 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3027g00012 Gabi-Chr3027 141283 145165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3027g00012 10 387 Nodulin-like Gene Family AT3G28050 42.092 7.43e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3027g00012 - - gmx:100814600 461.07