Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3027g00011 ATGGTGAGTGGAGAAGTAAGTGTAACAGCTGCAATGGTTGCAGCTCAGTTCTTGGAAGTGGGCTTGAACACTCTAATCAAAGCAGCCACCAACAATGGAATGAGTAATTATGTTTTCGTTGTGTATTCAAACCTTTTGGCTCTATGCTTCCTTCTACCATCCACCCTTCTTTACCACAGGAAGAGAGCTCCTCCACCAATCCCAACCTCAATTCTCTGCACAATATTTCTTCTTAGCTGTCTCAGTACTGCAGTTCAGACTTTGATGTATAATGGTATAGGATATAGCTCTCCCACTCTGGCCTCAGCTATGGTAGACCTTGTCCCTGCTTTTACCTTCATTCTTGCAGTAATTTTCAGGATGGAAAATTTGAATCTGAAACTGCATAGCTGTCAGGCAAAAGTTATTGGCACAGTGGTCTCCATTGCAGGGGCATTAATTGTGACTTTATATAAAGGGGTGCCATTGACTAGTGGTCCCTTACGAAATATAGTAATGGGTGGAAGTGGAAGTTACCTCTCAGTGCAATCATTCTGGTTACTTGGTGGTTTTCTTCTTGCAATTGCTAGCTTTTGCCTTTCAGTTTTGTTTATTGTCCAGACTTGGATTATCAAGAACTATCCTGAAGAGCTAGTTGTAACAACCATTTGTTGCAGCTTCGTAGTAGTCCTATCCGCCATAGTAGCTCTAATTGCAGAGGGTGATCCAAAAGCTTGGGTATTCAGAACTGATAAGGAGTTTGTAGCTGTTTGTTATGCAGCAATTTTTGTGGTATCAATGAGGAGTGTTGTGTTCACATGGGCATGTCGTAAGAAGGGGCCAGTTTATGTAGCTATGTTCAACCCTTTAGGAATGGTCATTGCACTTGGCACGGGGTTAATATTTCTAGGAGACAATCTTTATCTTGGAAGCTTGATTGGAGCTGCAACAATAGCTATTGGGTTTTATGCTGTGATGTGGGCGCAGGCTCAAGAGGAAAATGTGGTTAATAAGAAGGAGGAGACCTATGATTCTGCCTCAACTTCTACAACCCCTCTGTTGTCGGCCAAAAGCACCGGTGTGTAA 1065 0.4263 MVSGEVSVTAAMVAAQFLEVGLNTLIKAATNNGMSNYVFVVYSNLLALCFLLPSTLLYHRKRAPPPIPTSILCTIFLLSCLSTAVQTLMYNGIGYSSPTLASAMVDLVPAFTFILAVIFRMENLNLKLHSCQAKVIGTVVSIAGALIVTLYKGVPLTSGPLRNIVMGGSGSYLSVQSFWLLGGFLLAIASFCLSVLFIVQTWIIKNYPEELVVTTICCSFVVVLSAIVALIAEGDPKAWVFRTDKEFVAVCYAAIFVVSMRSVVFTWACRKKGPVYVAMFNPLGMVIALGTGLIFLGDNLYLGSLIGAATIAIGFYAVMWAQAQEENVVNKKEETYDSASTSTTPLLSAKSTGV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3027g00011 354 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Gabi3027g00011 354 Pfam EamA-like transporter family 20 149 IPR000620 GO:0016020
Gabi3027g00011 354 PANTHER WAT1-RELATED PROTEIN 8 333 IPR030184 GO:0016020|GO:0022857
Gabi3027g00011 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Gabi3027g00011 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3027g00011 Gabi-Chr3027 129623 132001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3027g00011 10 328 Nodulin-like Gene Family AT5G40240 42.857 1.63e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3027g00011 - - gmx:100793168 515.383