Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3027g00001 | ATGGCATCCAGATCATATGCTACTCTACTAGACTTAGCTGGAGGTTTACTGGATATTCCTCACACCCCAAGAACTATTCCAAGGATTATGACAGTTCCTGGAGTTATTTCTAACCTGGACTTTTGTGGTAGAAATGATGGGGATTCAGATGTCAGCTCTTCTGGCTGTCTGGAGCGGAAAATCATTGTGGCAAACATGTTGCCATTGCAGGCTAAAAGAGATATAGAAACTGCTAAATGGTGTTTCAGTTTGGATGAAGATTCAATTTTGCTACAATTAAAAGATGGTTTTTCTTCCGATACCGAGGTGATCTATGTGGGATCTCTCAAGGTTGAAATAGATACCAGTGAGCAGGAAGAAGTTGCTCAGAAATTACTGGAGGAATTCAATTGCATACCTACCTTTCTACCCCATGATCTCCAGAAAAAATTCTATCTTGGCTTCTGCAAGCAGCAGCTTTGGCCTCTCTTTCATTACATGTTACCTATGTGCCCTGATCATGGTGACCGTTTTGACCGCTTACTTTGGAAGGCCTATGTTTCTGCAAACAAAATATTTGCAGATAAGGTTATGGAAATAATCAATCCGGATGATGATTTTGTTTGGGTTCATGACTATCACCTGATGGTTTTGCCAACATTCCTAAGGAAGCGGTATAATCGAGTTAAACTAGGATTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCGGTAAGGGAAGAAATTCTGAGGGGATTGTTGAATTCTGATTTAATTGGTTTTCATACGTTTGATTATGCTCGTCACTTCCTCTCTTGCTGCACTAGAATGCTAGGTCTGGACTATGAATCTAAGCGAGGACATATAGGACTTGATTACTTTGGCCGGACTATATTTATCAAAATTTTGCCTGTAGGCATTCACATGGGTCGGCTTGAATCTGTATTAAATCTTCATTCTACATCCACTAAATTGAAAGAGATTCAGGAAGAATTTAAGGGTAAGAAGGTGATTCTCGGTGTTGACGACATGGATATTTTTAAGGGCATCAGTCTGAAGCTTCTAGCTGTTGAGCAGCTGCTGCAGCAGAATCCAGATTTGCGGGGCAAAGTTGTCCTAGTTCAGATTGTGAATCCTGCTAGGGGTTCTGGGAAGGATGTTCAGGAAGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATTAATTATACTTATGGTTCAAACCATTATCGGCCAGTTATTCTCATTGACCGTCCTGTTCCTCGTTTTGAGAAGAGTGCTTATTATGCTGTAGCAGAATGTTGCATTGTCAATGCTGTGAGGGATGGCATGAACTTAGTCCCATACAAATATATTGTCTGTAGACAAGGAACTACACTGCTGGATAAAGCTTTGATTAGAAAAAGTGATTCTCCTCGTACAAGCGTGCTTGTTGTGTCTGAGTTCATTGGTTGTTCTCCTTCTCTAAGTGGAGCAATCAGAGTCAATCCTTGGGACATAGATGCTGTTGCTGATGCTCTGTATACAGCCATTACTATGCCTGATTCAGAGAAGCAATTGAGGCACGAGAAACACTACCGGTATGTCAGTTCTCATGATGTGGCGTATTGGGCACGCAGCTTTATGCAGGATTTAGAGAGAGCATGCAGAGATCATTACACCAAATGGTGCTGGGGAATTGGCTGGGGCCTAGGGTTTAAAGTTGTTTCTCTTTCTCCTGGTTTTAGGAAATTGTCTGTTGACCACATTGTTTCAGCATACAAAAGAACCACTAGAAGAGCTATATTTCTCGATTATGATGGTACTCTTGTATCACAATCTTCGATAAATAAAATCCCCAGTCCTGAAGTCATATCTCTGCTAAATGTTCTGTGCAATGATACTAAAAATACCGTGTTCATTGTGAGTGGGAGGGGAAGAGATTCTTTAAGTGATTGGTTTACTTCATGCAAAATGATCGGACTTGCAGCTGAACATGGATACTTTTTAAGGTGGACTCAAGATTCGGAATGGGAAACCAGCCACTTGTCTGCTGATCTTGATTGGAAAAAGATTGTTGAACCTGTCATGCAGTCGTATACAGAGGCAACTGACGGATCTAGTATTGAAATCAAAGAAAGTGCCTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGTTCTTGTCAAGCTAAAGAATTGTTGAATCACCTGGAAAGCGTGCTTGCCAATGAACCTGCAGTTGTTAAGAGGGGCCAGTATATTGTTGAAGTCAAGCCACAGGGAATAAGCAAGGGCTTGGTAGCTGAAAATATTCTTTCCACTATGGTTAATGGTGGAAATTCACCAGATTTTGTGATGTGCGTTGGGGATGATATTTCTGATGAAGACATGTTTGAGAGCATATTAAGGACGGTCTCATCCCCATCATTGCCGTTAGCTCCAGAGATCTTTGCCTGCACTGTTGGTCAGAAACCTAGCAAGGCCAAGTACTATCTTGATGATCCTGCTGATGTTGTGAAGTTGCTTCAAGGCCTTGGTACTTCATCTCATCCTAAGCCCAGGCATCTAGCCCAATTCCAAGTTTCTTTTGAGAGCACAATTTGA | 2583 | 0.415 | MASRSYATLLDLAGGLLDIPHTPRTIPRIMTVPGVISNLDFCGRNDGDSDVSSSGCLERKIIVANMLPLQAKRDIETAKWCFSLDEDSILLQLKDGFSSDTEVIYVGSLKVEIDTSEQEEVAQKLLEEFNCIPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRLLWKAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVREEILRGLLNSDLIGFHTFDYARHFLSCCTRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLESVLNLHSTSTKLKEIQEEFKGKKVILGVDDMDIFKGISLKLLAVEQLLQQNPDLRGKVVLVQIVNPARGSGKDVQEAKKETYLIAQRINYTYGSNHYRPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTTLLDKALIRKSDSPRTSVLVVSEFIGCSPSLSGAIRVNPWDIDAVADALYTAITMPDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACRDHYTKWCWGIGWGLGFKVVSLSPGFRKLSVDHIVSAYKRTTRRAIFLDYDGTLVSQSSINKIPSPEVISLLNVLCNDTKNTVFIVSGRGRDSLSDWFTSCKMIGLAAEHGYFLRWTQDSEWETSHLSADLDWKKIVEPVMQSYTEATDGSSIEIKESALVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVKRGQYIVEVKPQGISKGLVAENILSTMVNGGNSPDFVMCVGDDISDEDMFESILRTVSSPSLPLAPEIFACTVGQKPSKAKYYLDDPADVVKLLQGLGTSSHPKPRHLAQFQVSFESTI | 860 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3027g00001 | 860 | Gene3D | - | 720 | 850 | IPR023214 | - | |
Gabi3027g00001 | 860 | Gene3D | - | 590 | 709 | IPR023214 | - | |
Gabi3027g00001 | 860 | CDD | HAD_TPP | 592 | 833 | - | - | |
Gabi3027g00001 | 860 | FunFam | Alpha,alpha-trehalose-phosphate synthase | 313 | 528 | - | - | |
Gabi3027g00001 | 860 | FunFam | Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 720 | 851 | - | - | |
Gabi3027g00001 | 860 | SUPERFAMILY | HAD-like | 591 | 838 | IPR036412 | - | |
Gabi3027g00001 | 860 | Gene3D | Glycogen Phosphorylase B; | 312 | 528 | - | - | |
Gabi3027g00001 | 860 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 59 | 548 | - | - | |
Gabi3027g00001 | 860 | Pfam | Trehalose-phosphatase | 594 | 828 | IPR003337 | GO:0003824|GO:0005992 | |
Gabi3027g00001 | 860 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 52 | 311 | - | - | |
Gabi3027g00001 | 860 | Gene3D | Glycogen Phosphorylase B; | 55 | 311 | - | - | |
Gabi3027g00001 | 860 | FunFam | alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 | 590 | 707 | - | - | |
Gabi3027g00001 | 860 | FunFam | Trehalose-6-phosphate synthase 2 | 674 | 753 | - | - | |
Gabi3027g00001 | 860 | NCBIfam | trehalose-phosphatase | 589 | 837 | IPR003337 | GO:0003824|GO:0005992 | |
Gabi3027g00001 | 860 | CDD | GT20_TPS | 59 | 544 | IPR001830 | GO:0003824|GO:0005992 | |
Gabi3027g00001 | 860 | NCBIfam | HAD-IIB family hydrolase | 592 | 794 | IPR006379 | - | |
Gabi3027g00001 | 860 | PANTHER | TREHALOSE-6-PHOSPHATE SYNTHASE | 28 | 839 | IPR001830 | GO:0003824|GO:0005992 | |
Gabi3027g00001 | 860 | Pfam | Glycosyltransferase family 20 | 59 | 544 | IPR001830 | GO:0003824|GO:0005992 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3027g00001 | Gabi-Chr3027 | 10244 | 15928 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3027g00001 | 1 | 860 | Trehalose Biosynthesis Gene Families | AT1G60140 | 73.171 | 0.0 | 1350 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3027g00001 | K16055 | - | gmx:100818536 | 1581.62 |