Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3023g00002 ATGGCTTCTACTTCTTGCTCAAGGAATGAATTCAACCCCACCGATGATGAACTCATTCAATTGTTTCTTTACAATAAGATCAATGGGAACCCATTGCCTAAAGATGTTACTATTCTTGAATATGACTTATTTGGTATAAAGAACCCTTGGGAGATTTGGGAAGACTTTGCAGGTTCACATTCTTATCGTGGAACTGACCTTTATTTCTTCACCACCCTAAAGAAAAAGTTCTCCACTTGGTCACGCTCGGTTCGCACCATTGAGTATGGTTCATGGGAAGGTGAAGACAGGGGAAAAAATGTTGTGGCTAATGGCACGAAGCAATGTGTTGGGGCCAACAATTATGTTCTATGCAGGTTAAGAAAGAATATACGACATGATGATTATAACAAAAAGAATTTAAATAGAACTAGGCAAGAAGAGATCAAGGTGACCCAACAAAGGAAGAGAGTTGTTCTTGGACTTGGAGCTCCCACCGCATATGTCGATAGGAATGTTTGTTCGGGGGAAGACATTCATCAAGAACCAAGAAAACAAGTTGAATGTGGAGACAAGAGAACCAAAGAGGTTGAGATTTCCGCAAGAACTGAGTTGGTATATAAGGAAGACGAAGATGATGTTTTCACCATGATTTGGCCAGAGTTATTTCCGTTGCAGTTGAGAAAGGCTAATGGAGGCTTAGTCCAAGAGAAAGAAATCCAAATGCTTCCCAATACATTTTACACTGAGTTGTTGTTGGAGAGGTTACCGCCATTCTACATATGA 765 0.4026 MASTSCSRNEFNPTDDELIQLFLYNKINGNPLPKDVTILEYDLFGIKNPWEIWEDFAGSHSYRGTDLYFFTTLKKKFSTWSRSVRTIEYGSWEGEDRGKNVVANGTKQCVGANNYVLCRLRKNIRHDDYNKKNLNRTRQEEIKVTQQRKRVVLGLGAPTAYVDRNVCSGEDIHQEPRKQVECGDKRTKEVEISARTELVYKEDEDDVFTMIWPELFPLQLRKANGGLVQEKEIQMLPNTFYTELLLERLPPFYI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3023g00002 254 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
Gabi3023g00002 254 Pfam No apical meristem (NAM) protein 10 114 IPR003441 GO:0003677|GO:0006355
Gabi3023g00002 254 Gene3D NAC domain 14 123 IPR036093 GO:0003677|GO:0006355
Gabi3023g00002 254 PANTHER NAC TRANSCRIPTION FACTOR 56 10 116 - -
Gabi3023g00002 254 SUPERFAMILY NAC domain 11 120 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3023g00002 Gabi-Chr3023 34853 36165 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3023g00002 11 111 NAC Transcription Factor Family AT3G15510 32.673 3.96e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi3023g00002 NAM 4.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3023g00002 - - mtr:11433340 210.69