Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3023g00001 ATGGCTCCTATTTCGTGTTCAAGGAAAGAGTTCAAACCCACTGATGATGAACTCATCCAATTGTTTCTTTACAATAAGGTCAATGGGAAACCATTGCCAACTGATGTTTCGATTCTTGAATATGACTTATTTGGTGAAAAGAACCCTTGGGAGATTTGGGAAGCCTTTGGAAGTTCCAACTCTTACGGTGGAACTGATCTTTACTTCTTAACCACTTTAAAGAAAAAGTTTTCCACTGGCTCACGCTTTGTTCGCACCATTGGATGTGGTTCATGGGAAGCTGAAGACAGTGGAAAAAATATTATGGCCAGTGGCACGATGCAATGTATTGGAACAAGGAGACGTTTACGATTTGAAAAGAGTGGCACCAACCATGATGGTGCTTGGATCTTGCATGAATATAGAATTGATTCATCCTTGTTAGAAAATCCATCAGCCGACAATTATGTTTTATGCAGATTTAGAAAGAATCTAAGACATGATCTTCACAAAAAACAAGGTGTGAAAAGAACTACACAAGAAGACATCGCTGTAACCCAATCGAGGAAGAGAGTTGTTCTTGGACTCGAAGCTTCCACCGTATATGTCGATAGGAATGTTAGTTCAGTGGAAGACATTCATCACGAACCAAGAAACCAAGTTGATTGTGGAGACAAGAGGATGAAGCTGGAGGTGGAGATTTCCAATAGAACTGAGTTCGTATATAAGGAACAAGAAGATGATGATCTCACCATGACTTGGCCAGAGTTATTTTCGTTGCAGATGAGAGAGGCTAATGGAGTCTTAGTCCAAGAAGAAGAGATCCAAATGCTTCCCAATACATTTTACCATGAATTTTTATTGGAGAGGTTATCGCCATCCTACTTATGA 870 0.3989 MAPISCSRKEFKPTDDELIQLFLYNKVNGKPLPTDVSILEYDLFGEKNPWEIWEAFGSSNSYGGTDLYFLTTLKKKFSTGSRFVRTIGCGSWEAEDSGKNIMASGTMQCIGTRRRLRFEKSGTNHDGAWILHEYRIDSSLLENPSADNYVLCRFRKNLRHDLHKKQGVKRTTQEDIAVTQSRKRVVLGLEASTVYVDRNVSSVEDIHHEPRNQVDCGDKRMKLEVEISNRTEFVYKEQEDDDLTMTWPELFSLQMREANGVLVQEEEIQMLPNTFYHEFLLERLSPSYL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3023g00001 289 ProSiteProfiles NAC domain profile. 5 157 IPR003441 GO:0003677|GO:0006355
Gabi3023g00001 289 SUPERFAMILY NAC domain 11 155 IPR036093 GO:0003677|GO:0006355
Gabi3023g00001 289 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Gabi3023g00001 289 PANTHER NAC TRANSCRIPTION FACTOR 56 10 199 - -
Gabi3023g00001 289 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3023g00001 Gabi-Chr3023 22770 24070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3023g00001 11 203 NAC Transcription Factor Family AT1G32770 31.163 1.27e-18 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi3023g00001 NAM 1e-18 No_clan